Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31671
         (623 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical ...    31   0.51 
Z49130-2|CAA88966.1|  396|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL132846-4|CAB60347.1|  328|Caenorhabditis elegans Hypothetical ...    29   3.6  
Z68114-2|CAA92158.1|  463|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical
           protein ZK973.2 protein.
          Length = 865

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = -3

Query: 228 EGETPRPKSTR-SATIQTSTGDNKP-IEDWSPIPLEKQTAKRSKLPVSGRR 82
           EG   R K+     TI+ S+ D+ P + + SP+P+EK+  K+ K P  G++
Sbjct: 174 EGRVSRSKTRDIRRTIEMSSADSSPSVRNRSPVPVEKE--KKQKKPRGGKK 222


>Z49130-2|CAA88966.1|  396|Caenorhabditis elegans Hypothetical
           protein T06D8.3 protein.
          Length = 396

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 19/69 (27%), Positives = 35/69 (50%)
 Frame = +3

Query: 105 YFVSPSAFQEGWATSLLSAYYPLLMSGSSLIVCFWAEVFHLRNIRWESPRFLSKSFLAFV 284
           YF+ PSA       + L+A +  L   S  +  +   VF+ R++    P F+ + F  +V
Sbjct: 35  YFIFPSAVLHVVGIACLAALWYYLRFTS--VFPYHHRVFYCRDVHLYKPNFVPEDFNVYV 92

Query: 285 TFNLINYSL 311
           ++ L+ Y+L
Sbjct: 93  SYPLL-YTL 100


>AL132846-4|CAB60347.1|  328|Caenorhabditis elegans Hypothetical
           protein Y43D4A.6 protein.
          Length = 328

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -1

Query: 362 LLGRSISDVRCKDLGCQQRVVDEVEGNEGQERLGQEPWTLPADVAKVKHLGP 207
           LL  S   ++  D G   R + + +     ER+G  P+  P   AK KH GP
Sbjct: 135 LLINSSDALKIADFGLSTRFIVDDKEILLHERIGTTPFMAPELFAKKKHRGP 186


>Z68114-2|CAA92158.1|  463|Caenorhabditis elegans Hypothetical
           protein F17A2.3 protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +2

Query: 128 SRGMGDQSSIGLLSPVDVWIVADRVLLGRGVSPSQHPLGESKVPVQVVP 274
           +R +   SS  L  P++V ++ D+  + R +   +HPL E +     +P
Sbjct: 300 TRSVHSTSSNELSEPIEVHLLVDKSEVNRHIKSKEHPLLEDQNFTACIP 348


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,013,979
Number of Sequences: 27780
Number of extensions: 289008
Number of successful extensions: 870
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)