Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31654
         (640 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032762-1|AAH32762.1|  571|Homo sapiens OPTN protein protein.         36   0.12 
BC013876-1|AAH13876.1|  577|Homo sapiens optineurin protein.           36   0.12 
AL355355-6|CAI16550.1|  571|Homo sapiens optineurin protein.           36   0.12 
AL355355-5|CAI16549.1|  577|Homo sapiens optineurin protein.           36   0.12 
AF420373-1|AAL76329.1|  577|Homo sapiens optineurin isoform 3 pr...    36   0.12 
AF420372-1|AAL76328.1|  577|Homo sapiens optineurin isoform 2 pr...    36   0.12 
AF420371-1|AAL76327.1|  577|Homo sapiens optineurin isoform 1 pr...    36   0.12 
AF283527-1|AAG00497.1|  577|Homo sapiens FIP2 protein.                 36   0.12 
AF061034-1|AAC16046.1|  577|Homo sapiens FIP2 protein.                 36   0.12 
BC017977-1|AAH17977.1|  360|Homo sapiens Unknown (protein for IM...    32   1.5  

>BC032762-1|AAH32762.1|  571|Homo sapiens OPTN protein protein.
          Length = 571

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 477 DDKSTEELQKRFGELLDENLILKETLKQNNDSMKG 581
           D  + EEL ++  ELL EN  LKE +K NN +MKG
Sbjct: 33  DTFTPEELLQQMKELLTENHQLKEAMKLNNQAMKG 67


>BC013876-1|AAH13876.1|  577|Homo sapiens optineurin protein.
          Length = 577

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 477 DDKSTEELQKRFGELLDENLILKETLKQNNDSMKG 581
           D  + EEL ++  ELL EN  LKE +K NN +MKG
Sbjct: 33  DTFTPEELLQQMKELLTENHQLKEAMKLNNQAMKG 67


>AL355355-6|CAI16550.1|  571|Homo sapiens optineurin protein.
          Length = 571

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 477 DDKSTEELQKRFGELLDENLILKETLKQNNDSMKG 581
           D  + EEL ++  ELL EN  LKE +K NN +MKG
Sbjct: 33  DTFTPEELLQQMKELLTENHQLKEAMKLNNQAMKG 67


>AL355355-5|CAI16549.1|  577|Homo sapiens optineurin protein.
          Length = 577

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 477 DDKSTEELQKRFGELLDENLILKETLKQNNDSMKG 581
           D  + EEL ++  ELL EN  LKE +K NN +MKG
Sbjct: 33  DTFTPEELLQQMKELLTENHQLKEAMKLNNQAMKG 67


>AF420373-1|AAL76329.1|  577|Homo sapiens optineurin isoform 3
           protein.
          Length = 577

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 477 DDKSTEELQKRFGELLDENLILKETLKQNNDSMKG 581
           D  + EEL ++  ELL EN  LKE +K NN +MKG
Sbjct: 33  DTFTPEELLQQMKELLTENHQLKEAMKLNNQAMKG 67


>AF420372-1|AAL76328.1|  577|Homo sapiens optineurin isoform 2
           protein.
          Length = 577

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 477 DDKSTEELQKRFGELLDENLILKETLKQNNDSMKG 581
           D  + EEL ++  ELL EN  LKE +K NN +MKG
Sbjct: 33  DTFTPEELLQQMKELLTENHQLKEAMKLNNQAMKG 67


>AF420371-1|AAL76327.1|  577|Homo sapiens optineurin isoform 1
           protein.
          Length = 577

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 477 DDKSTEELQKRFGELLDENLILKETLKQNNDSMKG 581
           D  + EEL ++  ELL EN  LKE +K NN +MKG
Sbjct: 33  DTFTPEELLQQMKELLTENHQLKEAMKLNNQAMKG 67


>AF283527-1|AAG00497.1|  577|Homo sapiens FIP2 protein.
          Length = 577

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 477 DDKSTEELQKRFGELLDENLILKETLKQNNDSMKG 581
           D  + EEL ++  ELL EN  LKE +K NN +MKG
Sbjct: 33  DTFTPEELLQQMKELLTENHQLKEAMKLNNQAMKG 67


>AF061034-1|AAC16046.1|  577|Homo sapiens FIP2 protein.
          Length = 577

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 477 DDKSTEELQKRFGELLDENLILKETLKQNNDSMKG 581
           D  + EEL ++  ELL EN  LKE +K NN +MKG
Sbjct: 33  DTFTPEELLQQMKELLTENHQLKEAMKLNNQAMKG 67


>BC017977-1|AAH17977.1|  360|Homo sapiens Unknown (protein for
           IMAGE:4697938) protein.
          Length = 360

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +3

Query: 486 STEELQKRFGELLDENLILKETLKQNNDSMK 578
           S EEL+ RF  L DEN++LK+  ++  D +K
Sbjct: 46  SREELEDRFLRLHDENILLKQHARKQEDKIK 76


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,362,148
Number of Sequences: 237096
Number of extensions: 1516794
Number of successful extensions: 3373
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3373
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)