Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31597
         (636 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46753-6|AAO21474.1|  740|Caenorhabditis elegans Hypothetical pr...    52   3e-07
U46753-5|ABB88235.1|  803|Caenorhabditis elegans Hypothetical pr...    52   3e-07
U46753-4|AAO21475.1|  764|Caenorhabditis elegans Hypothetical pr...    52   3e-07
U46674-4|AAA85756.1|  574|Caenorhabditis elegans Hypothetical pr...    32   0.30 
U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U55855-3|AAA98019.2|  893|Caenorhabditis elegans Ubiquitin-like ...    28   6.4  

>U46753-6|AAO21474.1|  740|Caenorhabditis elegans Hypothetical
           protein C34F11.3a protein.
          Length = 740

 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 21/29 (72%), Positives = 26/29 (89%)
 Frame = -2

Query: 635 NDITRTNVPDIRISFRHETILDELTNIFK 549
           NDI RTNVPDIR+SFRHE ++DEL N+F+
Sbjct: 705 NDIHRTNVPDIRVSFRHEALVDELYNLFR 733


>U46753-5|ABB88235.1|  803|Caenorhabditis elegans Hypothetical
           protein C34F11.3c protein.
          Length = 803

 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 21/29 (72%), Positives = 26/29 (89%)
 Frame = -2

Query: 635 NDITRTNVPDIRISFRHETILDELTNIFK 549
           NDI RTNVPDIR+SFRHE ++DEL N+F+
Sbjct: 768 NDIHRTNVPDIRVSFRHEALVDELYNLFR 796


>U46753-4|AAO21475.1|  764|Caenorhabditis elegans Hypothetical
           protein C34F11.3b protein.
          Length = 764

 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 21/29 (72%), Positives = 26/29 (89%)
 Frame = -2

Query: 635 NDITRTNVPDIRISFRHETILDELTNIFK 549
           NDI RTNVPDIR+SFRHE ++DEL N+F+
Sbjct: 729 NDIHRTNVPDIRVSFRHEALVDELYNLFR 757


>U46674-4|AAA85756.1|  574|Caenorhabditis elegans Hypothetical
           protein T26A8.4 protein.
          Length = 574

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 593 FRHETILDELTNIFKSRQPPSNSISFGSPVIPPPANFSA 477
           F  E +L+++ N  K    P N++   SP  PPP+N+S+
Sbjct: 439 FNLEAMLNKMANGEKLISSPRNNVVDDSPASPPPSNYSS 477


>U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical
           protein F59A3.2b protein.
          Length = 687

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -2

Query: 581 TILDELTNIFKSRQPPSNSISFGSPVIPPPANFSAPTVTLKRPS 450
           T+L   T +F    P  N  S  +P IPPP  +S+P   L  P+
Sbjct: 528 TLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPT 571


>U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical
           protein F59A3.2a protein.
          Length = 975

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -2

Query: 581 TILDELTNIFKSRQPPSNSISFGSPVIPPPANFSAPTVTLKRPS 450
           T+L   T +F    P  N  S  +P IPPP  +S+P   L  P+
Sbjct: 528 TLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPT 571


>U55855-3|AAA98019.2|  893|Caenorhabditis elegans Ubiquitin-like
           protease protein 2 protein.
          Length = 893

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 611 PDIRISFRHETILDELTNIFKSRQPPSNSISFGSPVIPPP 492
           PD+  +  H T   E  ++ KS + P++ +SF     PPP
Sbjct: 333 PDMDNAMTHPTSNFENEDVMKSTKQPNDFVSFEQLQAPPP 372


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,406,156
Number of Sequences: 27780
Number of extensions: 206144
Number of successful extensions: 668
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)