Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31586
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        26   0.39 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        26   0.39 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        26   0.39 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   1.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.4  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 263 LQTEEGQDILKNKPRINSKTIAFETLSQMPENSLGRV-YADFMKDNNITAD 412
           L  EE  D  K+   +N KT+A      +PEN L    Y D ++ N+   D
Sbjct: 333 LGEEEKADWWKDIMLLNEKTLAVPAPPVLPENHLKNAKYLDVIERNSGATD 383


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 263 LQTEEGQDILKNKPRINSKTIAFETLSQMPENSLGRV-YADFMKDNNITAD 412
           L  EE  D  K+   +N KT+A      +PEN L    Y D ++ N+   D
Sbjct: 333 LGEEEKADWWKDIMLLNEKTLAVPAPPVLPENHLKNAKYLDVIERNSGATD 383


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 263 LQTEEGQDILKNKPRINSKTIAFETLSQMPENSLGRV-YADFMKDNNITAD 412
           L  EE  D  K+   +N KT+A      +PEN L    Y D ++ N+   D
Sbjct: 333 LGEEEKADWWKDIMLLNEKTLAVPAPPVLPENHLKNAKYLDVIERNSGATD 383


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 231 SPVTSPKQAIISPR*GSSKAITAEPH 154
           SP+TS K  I+     S+ ++T  PH
Sbjct: 331 SPMTSTKSTIVRNHLNSTCSVTNSPH 356


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 314 SKTIAFETLSQMPENSLGRVYADF 385
           S  + +    Q  EN LGRV A+F
Sbjct: 37  SAQVCYRGAPQDSENLLGRVLAEF 60


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 410 DSRLPVQFIADPELAYVMQ 466
           +S+LPV+ I  P+L+  MQ
Sbjct: 57  ESKLPVKAITLPDLSIPMQ 75


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,551
Number of Sequences: 438
Number of extensions: 4222
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)