Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31576
         (743 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   4.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   4.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   9.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   9.2  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 52  HRGSQS*TFVKSFTRCIKKQAALFLCIASN 141
           + GSQ     +SF + + K   LFL +  N
Sbjct: 298 YEGSQDILNTQSFGKVVSKNGVLFLGLVGN 327


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -3

Query: 279 HFDGATKK*INTYV*IGRYNISVLFID 199
           + DG   + +  +V IGR N+ VL+++
Sbjct: 800 YLDGNVLRELQNHVFIGRKNMRVLYVN 826


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 500 YFFSNCLTTYKKNLSRIISQLN 435
           YF   CL TY  N S  +++++
Sbjct: 284 YFIRGCLQTYLINASTYLNEVH 305


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 500 YFFSNCLTTYKKNLSRIISQLN 435
           YF   CL TY  N S  +++++
Sbjct: 322 YFIRGCLQTYLINASTYLNEVH 343


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 453 DHFPIKYKLILSNE*NV 403
           DH P +YK+ + +E NV
Sbjct: 514 DHQPYQYKIAVHSEQNV 530


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 85  SFTRCIKKQAALFLCIASN 141
           S  R  +  +ALF C+A+N
Sbjct: 841 SIKRTERSDSALFTCVATN 859


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 209 CLLILSASIKCVDQKLDWKCAHLLLAIHRKS 117
           CLL+ ++ I CVD   +W    L+  I+ +S
Sbjct: 11  CLLLAASPIDCVD--ANWYKNALVYQIYPRS 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,897
Number of Sequences: 438
Number of extensions: 3891
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)