Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31569
(623 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.79
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 2.4
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 4.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 5.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.6
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 21 7.4
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 21 7.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 9.8
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 9.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 9.8
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.6 bits (51), Expect = 0.79
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 162 TPTCPALHPQGRAEVRRFPPDQKKNPP 82
TP PA QG+A+ + P Q+ N P
Sbjct: 998 TPPQPANAQQGQAQAQAKPQSQEANKP 1024
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +1
Query: 286 PPLRDAGPAVVGATTTSPFGWQAIRCPPRLRRLEWVILQNTPLG 417
PP G AV G + F A R +W+ N+P+G
Sbjct: 54 PPSVPVGSAVAGTAGGALFPGMAAAGKGAARSDDWLANANSPVG 97
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +3
Query: 45 WLRA*FLSYNFLWEGFFFGQEEIAGLPP 128
WLR + Y W+ +G + LPP
Sbjct: 78 WLRFIWTDYQLQWDEADYGGIGVLRLPP 105
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -3
Query: 153 CPALHPQGRAEVRRFPPDQKKNPPIKSYNLKIKPV 49
C AL Q + PP+ N I+ Y L +P+
Sbjct: 1120 CAALTSQSLQVSWQPPPNTHSNGIIQGYKLHYEPI 1154
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -1
Query: 503 KKTTYKLLCTRFTHPGDGRP 444
K T Y + FT GDG P
Sbjct: 1182 KYTNYTIQVLAFTRVGDGVP 1201
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -3
Query: 153 CPALHPQGRAEVRRFPPDQKKNPPIKSYNLKIKPV 49
C AL Q + PP+ N I+ Y L +P+
Sbjct: 1116 CAALTSQSLQVSWQPPPNTHSNGIIQGYKLHYEPI 1150
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -1
Query: 503 KKTTYKLLCTRFTHPGDGRP 444
K T Y + FT GDG P
Sbjct: 1178 KYTNYTIQVLAFTRVGDGVP 1197
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 21.4 bits (43), Expect = 7.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 132 GRAEVRRFPPDQKKNPPIKSYNLKIKPVTNFIICVITDVR 13
G + R P +K+ P + LKI + FI+ V D R
Sbjct: 27 GSSSPRPKPLLKKEYPLVMDTKLKIIEILQFILDVRLDYR 66
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 386 NGLSYRIPRWVRTSVCRG*PAFH 454
+ L+ R+ WV TSV R F+
Sbjct: 266 HSLASRVESWVNTSVIRNYTLFN 288
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 407 VFCRITHSNRRNLGG 363
V C+++HSN GG
Sbjct: 224 VICKLSHSNASVAGG 238
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 407 VFCRITHSNRRNLGG 363
V C+++HSN GG
Sbjct: 224 VICKLSHSNASVAGG 238
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 150 PALHPQGRAEVRRFPPDQKKNPP 82
P+ H +A R PP+ + PP
Sbjct: 25 PSPHQSPQAPQRGSPPNPSQGPP 47
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,784
Number of Sequences: 438
Number of extensions: 3705
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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