Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31556
(450 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 57 1e-09
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 45 5e-06
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 37 0.002
SPCC417.11c |||glutamate-1-semialdehyde 2,1-aminomutaseaminotran... 31 0.11
SPBC1773.03c |||aminotransferase class-III, unknown specificty|S... 30 0.14
SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomy... 27 1.0
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 27 1.8
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 27 1.8
SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein |Schizosacch... 27 1.8
SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein 2|S... 26 2.3
SPAC27F1.05c |||aminotransferase class-III, unknown specificty|S... 26 3.1
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 26 3.1
SPBC4B4.04 |||translation initiation factor eIF2A |Schizosacchar... 25 4.1
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 5.4
SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 5.4
SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit Vps23|Schizosac... 25 5.4
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 25 7.1
SPAC3A12.03c |mug145||ubiquitin-protein ligase E3 |Schizosacchar... 25 7.1
SPBC428.13c |mob1||protein kinase regulator Mob1|Schizosaccharom... 25 7.1
SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion cytoch... 24 9.4
SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyc... 24 9.4
SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion ... 24 9.4
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 56.8 bits (131), Expect = 1e-09
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +3
Query: 189 SITNAYKK-PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLW 365
+I + Y + PV+ +G +L+D +G++Y+D G+ S+GH HP+V DQ L
Sbjct: 46 NIISVYARYPVVAAKGEGSYLFDKEGRKYIDFTSGVAVTSLGHAHPEVARLAADQCSKLV 105
Query: 366 HTTNLY 383
H++NL+
Sbjct: 106 HSSNLF 111
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 45.2 bits (102), Expect = 5e-06
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +3
Query: 144 SYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHP 323
S +Q+E ++ Y + N + PV ++ ++D +G+ YLD V+ GHCHP
Sbjct: 12 STEQIEVLENEY---AAHNYHPLPVCFSKAKGAKVWDPEGREYLDFLSAYSAVNQGHCHP 68
Query: 324 KVNAALKDQ 350
K+ AL +Q
Sbjct: 69 KIIEALVEQ 77
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 36.7 bits (81), Expect = 0.002
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +3
Query: 213 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHX 392
P ++ + +YD LD G ++ +GH HP + A ++ L L H + +
Sbjct: 33 PKIIVRAKGCCVYDEQDNAILDFTSGQMSAILGHSHPDITACIEKNLPKLVHLFSGFLSP 92
Query: 393 KIYEYVEQLAAKLPGDLN 446
+ + +L+ LP L+
Sbjct: 93 PVVQLATELSDLLPDGLD 110
>SPCC417.11c |||glutamate-1-semialdehyde
2,1-aminomutaseaminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 435
Score = 30.7 bits (66), Expect = 0.11
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +3
Query: 213 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLD 356
P+ + G+ L D DG Y D + GH +P + AL D
Sbjct: 52 PIFIEAGYGSKLRDVDGHEYTDFLNELTAGIYGHSNPVIKKALMQGFD 99
>SPBC1773.03c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 30.3 bits (65), Expect = 0.14
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 195 TNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQ 350
T+ +P + + +LY DG R +D GG +GH + +V A+ Q
Sbjct: 22 TSPNHRPPTVVRAEGVYLYLEDGTRIMDATGGAAVACLGHGNKEVIDAMHKQ 73
>SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 421
Score = 27.5 bits (58), Expect = 1.0
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +2
Query: 38 EMANRGT--KLCFDIVRTYSTAKMPPTDF 118
E+ANR KLC+ I++ A +PPT+F
Sbjct: 355 EIANRPRDFKLCYWILKEIGVATIPPTEF 383
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 26.6 bits (56), Expect = 1.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 104 PPTDFVPSTVHGTFVPTSRTNERSLHA 184
P +DFV VH TFVP T+ L+A
Sbjct: 557 PCSDFVVVPVHETFVPIGLTSYGRLYA 583
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 26.6 bits (56), Expect = 1.8
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 135 TGPSYQQVEQMKGVYMPPSITNAYKKPVLL 224
+G SY+ V+ + VY+ PS + A KKP ++
Sbjct: 977 SGDSYRTVKSNQTVYIHPSSSVAEKKPKVI 1006
>SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1294
Score = 26.6 bits (56), Expect = 1.8
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 20 STEKHIEMANRGTKLCFDIVRTYSTAKMPPTDFVPSTVHGTFVPTSR 160
+ EKH EM++ L F+ +K+P +++ P+TV V TS+
Sbjct: 71 AAEKHKEMSSDDRALLFN-----ELSKVPNSEYYPATVDALIVITSQ 112
>SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 26.2 bits (55), Expect = 2.3
Identities = 9/34 (26%), Positives = 16/34 (47%)
Frame = -3
Query: 331 FTFG*QWPTETVTIPPNRSRYLLPSLSYNHCMCP 230
+T+ +W E + P Y++ YN +CP
Sbjct: 108 YTYNSRWKIEIPSYPVREIPYVVADTPYNKLLCP 141
>SPAC27F1.05c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 1|||Manual
Length = 484
Score = 25.8 bits (54), Expect = 3.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 252 DNDGKRYLDLFGGIVTVSVGH 314
D G +LDL GG+ V+VG+
Sbjct: 85 DEKGTEHLDLIGGVGVVTVGN 105
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 25.8 bits (54), Expect = 3.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 39 KWLIEEQNYASTSSERTARPKCRRRISCPVPYTGPS 146
K + + N A R RPK +RRI+ V + P+
Sbjct: 525 KLKLSQSNKAGPVKHRKRRPKSKRRITGKVVFDSPN 560
>SPBC4B4.04 |||translation initiation factor eIF2A
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 576
Score = 25.4 bits (53), Expect = 4.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 202 PIRSRCFSPRGTCSGYTTTT 261
P R+ C+SP G Y T T
Sbjct: 36 PARNACYSPNGKLFAYATAT 55
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.0 bits (52), Expect = 5.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 104 PPTDFVPSTVHGTFVPTSRTNERSL 178
PPTD PS T VPT+ S+
Sbjct: 128 PPTDNKPSASTSTAVPTTEARNTSI 152
>SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 551
Score = 25.0 bits (52), Expect = 5.4
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +2
Query: 29 KHIEMANRGTKLCFDIVRTYSTAKMPPTDFVPSTVHGTFVPTSRTNERSLHAAFNHE 199
KH+E + +G L + T PP PS+ VP S + S+ + N E
Sbjct: 261 KHLESSEQGNNLLINKAFTSPRLPSPPQSTRPSSTRFPSVPLS-DEKNSIVSVKNEE 316
>SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit
Vps23|Schizosaccharomyces pombe|chr 1|||Manual
Length = 487
Score = 25.0 bits (52), Expect = 5.4
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 63 YASTSSERTARPKCRRRISCPVPYTGPSYQQVEQMKGVYMP--PSITNAYKKPVLLTQ 230
+++TS + RR S +P P + EQ + + PS+ + Y KP LL Q
Sbjct: 228 FSATSQQLVHDSVSLRRPSSNIPAQKPIPPKPEQNEIIITKDTPSLKDKYSKPALLPQ 285
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 24.6 bits (51), Expect = 7.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 66 ASTSSERTARPKCRRRISCPVPYTGPSYQQVE 161
AS+SS ARP +S PVP + Y+ ++
Sbjct: 264 ASSSSSAKARPVSVPDMSSPVPASSVEYESLK 295
>SPAC3A12.03c |mug145||ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 24.6 bits (51), Expect = 7.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 335 CIYFRMTMAHGDGDDSTEQIQ 273
C+YF T+ + +GDD IQ
Sbjct: 48 CVYFYHTLENQEGDDERPLIQ 68
>SPBC428.13c |mob1||protein kinase regulator
Mob1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 24.6 bits (51), Expect = 7.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 117 SCPVPYTGPSYQQVEQMKGVYMPPSITNA 203
SCP GPSY+ Q +Y P+ +A
Sbjct: 81 SCPQMNAGPSYEYYWQDDKIYTKPTRMSA 109
>SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion
cytochrome c oxidase assembly protein Cox1101,
mitochondrial ribosomal protein
Rsm22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 24.2 bits (50), Expect = 9.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 423 RLIVPRTHRFSXVCTGWSYATIHR 352
RL VPR+HR S + +SY I +
Sbjct: 355 RLYVPRSHRRSSDRSHYSYVVIQK 378
>SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 517
Score = 24.2 bits (50), Expect = 9.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 265 LPSLSYNHCMCPWVRSTGF 209
LPS S N+C W R GF
Sbjct: 230 LPSSSQNNCKANWKRWFGF 248
>SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion
cytochrome c oxidase assembly protein Cox1102,
mitochondrial ribosomal protein
Rsm2202|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 24.2 bits (50), Expect = 9.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 423 RLIVPRTHRFSXVCTGWSYATIHR 352
RL VPR+HR S + +SY I +
Sbjct: 355 RLYVPRSHRRSSDRSHYSYVVIQK 378
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,077,049
Number of Sequences: 5004
Number of extensions: 43681
Number of successful extensions: 148
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 166231220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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