Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31545
         (354 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023873-1|AAZ86794.1|  512|Drosophila melanogaster AT21758p pro...    73   8e-14
AE014134-1274|AAF52514.1|  512|Drosophila melanogaster CG5261-PB...    73   8e-14
AE014134-1275|AAF52515.1|  421|Drosophila melanogaster CG5261-PA...    38   0.005
L35770-1|AAA64525.1|  412|Drosophila melanogaster fringe protein...    29   2.2  
AY070927-1|AAL48549.1|  412|Drosophila melanogaster RE03010p pro...    29   2.2  
AE014296-3445|AAF51658.2|  412|Drosophila melanogaster CG10580-P...    29   2.2  
AE014297-4123|AAF56704.1|  245|Drosophila melanogaster CG13980-P...    27   5.2  

>BT023873-1|AAZ86794.1|  512|Drosophila melanogaster AT21758p
           protein.
          Length = 512

 Score = 73.3 bits (172), Expect = 8e-14
 Identities = 40/97 (41%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = +3

Query: 66  LRTIVLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQM- 242
           LR+++LR+   +  ++++  + + R +S++L   +    +   ++  T  S   W+    
Sbjct: 15  LRSVLLRSNNATY-VRRSTGNVVVRALSSQLINSRKLQSI--RSKLNTSQSPVTWSYNFA 71

Query: 243 RYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKL 353
           R Y++LP HI+V LPALSPTME GSIVSWEKKEGDKL
Sbjct: 72  RAYANLPEHIRVPLPALSPTMERGSIVSWEKKEGDKL 108


>AE014134-1274|AAF52514.1|  512|Drosophila melanogaster CG5261-PB,
           isoform B protein.
          Length = 512

 Score = 73.3 bits (172), Expect = 8e-14
 Identities = 40/97 (41%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = +3

Query: 66  LRTIVLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQM- 242
           LR+++LR+   +  ++++  + + R +S++L   +    +   ++  T  S   W+    
Sbjct: 15  LRSVLLRSNNATY-VRRSTGNVVVRALSSQLINSRKLQSI--RSKLNTSQSPVTWSYNFA 71

Query: 243 RYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKL 353
           R Y++LP HI+V LPALSPTME GSIVSWEKKEGDKL
Sbjct: 72  RAYANLPEHIRVPLPALSPTMERGSIVSWEKKEGDKL 108


>AE014134-1275|AAF52515.1|  421|Drosophila melanogaster CG5261-PA,
           isoform A protein.
          Length = 421

 Score = 37.5 bits (83), Expect = 0.005
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 303 MESGSIVSWEKKEGDKL 353
           ME GSIVSWEKKEGDKL
Sbjct: 1   MERGSIVSWEKKEGDKL 17


>L35770-1|AAA64525.1|  412|Drosophila melanogaster fringe protein
           protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +3

Query: 72  TIVLRNQILSDGLKKA-IRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQ 227
           T+++R  I S       +    T  + TELA+R    +LL     + V +TPQ
Sbjct: 89  TVIIRKDIRSFNFSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQ 141


>AY070927-1|AAL48549.1|  412|Drosophila melanogaster RE03010p
           protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +3

Query: 72  TIVLRNQILSDGLKKA-IRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQ 227
           T+++R  I S       +    T  + TELA+R    +LL     + V +TPQ
Sbjct: 89  TVIIRKDIRSFNFSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQ 141


>AE014296-3445|AAF51658.2|  412|Drosophila melanogaster CG10580-PA
           protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +3

Query: 72  TIVLRNQILSDGLKKA-IRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQ 227
           T+++R  I S       +    T  + TELA+R    +LL     + V +TPQ
Sbjct: 89  TVIIRKDIRSFNFSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQ 141


>AE014297-4123|AAF56704.1|  245|Drosophila melanogaster CG13980-PA
           protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
 Frame = +2

Query: 17  RPAHLDGIVLVKN-IDNVANNCV-----TESNLKRWS*ESYTVEHYEVH*YRTGK 163
           R + L+  VLVK  +D+   +CV     T + L+R++   YT +++E+  Y T K
Sbjct: 18  RSSKLNEAVLVKRAVDDYHKSCVLLGGETGTRLRRYNFSEYTFKNFELFLYETLK 72


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,536,246
Number of Sequences: 53049
Number of extensions: 320500
Number of successful extensions: 723
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 859222404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)