Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31545
         (354 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    23   1.4  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   5.7  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   5.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    20   7.5  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    20   9.9  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    20   9.9  

>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 246 YYSSLPSHIKVNLPALSPTMES 311
           + + LP H+  N+P +  T+ S
Sbjct: 6   HVAQLPHHLSPNMPTMDSTVSS 27


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 341 FLFFPAYN*TTLHGWRKSWKVDLY 270
           F F P Y    ++G+   WK  L+
Sbjct: 217 FYFDPRYGNYNINGFNFQWKDGLF 240


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 352 SLSPSFFSQLTIEPLSMVGERA 287
           S+ P   S   +  ++MVGERA
Sbjct: 579 SVQPQVISGNPVASVNMVGERA 600


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 197 TEPDSSIYTTMDCSDEVLFESTITYKGQPS 286
           +EP  SIY+++      +F  T  ++  PS
Sbjct: 375 SEPRRSIYSSLLRYPRSIFRQTDDHQNSPS 404


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 95  DLIP*HNCSQHYQYF 51
           DL+P H C+++ + F
Sbjct: 249 DLVPKHACAEYRRNF 263


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 4   VSKKPSRSSGRNSFSKKY 57
           + KKPSRSS   SF + +
Sbjct: 547 LEKKPSRSSTLVSFLQPF 564


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,277
Number of Sequences: 438
Number of extensions: 2107
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)