Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31518
         (727 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    23   3.9  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   3.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   3.9  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   9.0  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   9.0  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.0  

>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 450 NILIQILFRCITFIINAWV 506
           N LIQ+   C+  ++ +WV
Sbjct: 215 NFLIQVYGPCVLLVVLSWV 233


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 108 WNFIHYSCNDFHNSVTWKQQ 49
           WN I+++ N  H S T K++
Sbjct: 547 WNSINFNENKLHTSDTLKEE 566


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 108 WNFIHYSCNDFHNSVTWKQQ 49
           WN I+++ N  H S T K++
Sbjct: 547 WNSINFNENKLHTSDTLKEE 566


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +3

Query: 429 SLENASFNILIQILFRCITFIINAWV 506
           +L+  +   LIQ+   C+  ++ +WV
Sbjct: 239 NLQRHTGYFLIQVYVPCVLIVVLSWV 264


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 452 YFNTNIIQVYYIY 490
           Y N N+ ++YYIY
Sbjct: 45  YQNLNLGEIYYIY 57


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 646 DDSIQNPSVVPKQALLNGSRLRN 578
           DD  +NPSVV ++      +LRN
Sbjct: 117 DDYQRNPSVVGRKKSSGWRKLRN 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,884
Number of Sequences: 438
Number of extensions: 3876
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)