Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31504
(510 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical pr... 69 1e-12
U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical pr... 62 2e-10
AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical... 51 6e-07
AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical ... 48 5e-06
AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical... 47 7e-06
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 44 5e-05
Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical... 41 5e-04
AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical ... 39 0.002
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 37 0.007
AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical... 35 0.030
AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical ... 35 0.030
AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical ... 33 0.12
Z78544-5|CAB01759.2| 324|Caenorhabditis elegans Hypothetical pr... 32 0.28
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 32 0.28
AY398504-1|AAQ96213.1| 324|Caenorhabditis elegans SEL-7 protein. 32 0.28
AL031265-2|CAE48506.1| 324|Caenorhabditis elegans Hypothetical ... 32 0.28
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 32 0.28
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 31 0.49
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 31 0.64
U58753-5|AAC24434.2| 348|Caenorhabditis elegans Hypothetical pr... 29 1.5
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 29 1.5
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.0
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 2.0
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical ... 29 2.6
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 28 4.5
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 28 4.5
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 28 4.5
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 28 4.5
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 28 4.5
U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical pr... 28 4.5
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 28 4.5
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 28 4.5
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 28 4.5
AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf (tbp-asso... 28 4.5
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 28 4.5
Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical p... 27 7.9
U40943-5|AAK39235.2| 279|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF067607-7|AAF98613.1| 433|Caenorhabditis elegans Serpentine re... 27 7.9
>Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical
protein F36G3.3 protein.
Length = 141
Score = 69.3 bits (162), Expect = 1e-12
Identities = 31/75 (41%), Positives = 39/75 (52%)
Frame = +1
Query: 253 QMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANH 432
++ P T CP C IVTR V T +F L L GC C +P+C SCKD H
Sbjct: 67 RLEPHATKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWCCCFLPFCLRSCKDIIH 126
Query: 433 YCPNCNAYIGSYKSL 477
CPNC A IG ++ +
Sbjct: 127 TCPNCRAMIGVHRRI 141
>U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical
protein F16F9.1 protein.
Length = 157
Score = 62.1 bits (144), Expect = 2e-10
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +1
Query: 220 PQQFVTVVPAQQMGPEPTN--TSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCAC 393
P V +V + P + T+C SC + T V + T + +L LI P A
Sbjct: 70 PNPTVVIVTTPKPAPSFASYETTCYSCGKYVHTLPKFVIGSLTWI-VFILVLICFFPLAF 128
Query: 394 IPYCTDSCKDANHYCPNCNAYIGSYKSL 477
+P+C DSCKDA+HYCP CNA +G K +
Sbjct: 129 VPFCLDSCKDAHHYCPRCNALLGIKKRI 156
>AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical
protein Y87G2A.19 protein.
Length = 110
Score = 50.8 bits (116), Expect = 6e-07
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +1
Query: 256 MGPEPTNTSCPSCSAAIVTRVDHVP--VTKTHLFALLLCLIGCCPC--ACIPYCTDSCKD 423
+ P CP C T + V T F +L+ P +P+C ++ KD
Sbjct: 29 LSDRPQLLDCPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWVPFCVETFKD 88
Query: 424 ANHYCPNCNAYIGSYKSLNIS 486
A HYCP+C A+IG+Y+ L S
Sbjct: 89 AEHYCPSCRAWIGTYRRLGKS 109
>AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical
protein Y37D8A.6 protein.
Length = 132
Score = 47.6 bits (108), Expect = 5e-06
Identities = 28/84 (33%), Positives = 37/84 (44%)
Frame = +1
Query: 220 PQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIP 399
PQ+ + V EP CP C+ + TRV+ + L L L P C
Sbjct: 50 PQEIIIVGTKMAPSFEPYTEFCPRCNTNVCTRVERT-MGFCSWTMLFLGLFVFFPLLCC- 107
Query: 400 YCTDSCKDANHYCPNCNAYIGSYK 471
+C D KD+ H CPNC + SYK
Sbjct: 108 FCLDGFKDSRHSCPNCGTIL-SYK 130
>AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical
protein Y87G2A.18 protein.
Length = 118
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +1
Query: 268 PTNTSCPSCSAAIVTRVDHVP-VTKTHLFALL------LCLIGCCPCACIPYCTDSCKDA 426
P CP C IV+ ++ V V +FA+L L +I C C C+P+ D D
Sbjct: 43 PIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFC-CVPFFLDQLLDV 101
Query: 427 NHYCPNCNAYIGSY 468
NH CP C ++G +
Sbjct: 102 NHSCPACKKFLGRF 115
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 44.4 bits (100), Expect = 5e-05
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +1
Query: 199 PSVTPAPPQQFVTVVPAQQMGPEPT-NTSCPSCSAAIVTRVDHVPVTKTHLFALL-LCLI 372
P + P P + + V+ +Q + +C C + TRV+H L A L C
Sbjct: 34 PPIDPRPCGRVIGVISVKQAPTYSSYQENCTRCQTLVQTRVEHKIGIMWWLCATLSFCFF 93
Query: 373 GCCPCACIPYCTDSCKDANHYCPNCNAYI 459
CC P KDA H+CPNC + +
Sbjct: 94 FCCYLLFFPIT----KDAQHFCPNCGSLL 118
>Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical
protein C08E8.1 protein.
Length = 102
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +1
Query: 277 TSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPY----CTDSCKDANHYCPN 444
T CP+C A +T V+ T + L+C G C C P+ C D KD NH CP+
Sbjct: 34 TYCPTCEKAYMTSVN----THIGVCWWLICFFGTVLC-CFPFLFFLCCDVSKDVNHNCPS 88
Query: 445 C 447
C
Sbjct: 89 C 89
>AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical
protein Y22D7AL.15 protein.
Length = 152
Score = 41.1 bits (92), Expect = 5e-04
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +1
Query: 283 CPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPNCNAYIG 462
CP C ++ TR H T + + + C P C S KD H+CPNC +
Sbjct: 88 CPRCQTSVTTRTVHSIGTCWWIILFIGVFVFCWPILYCLCCAGS-KDVKHFCPNCGTMLA 146
Query: 463 SYK 471
K
Sbjct: 147 CKK 149
>AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical
protein B0348.2 protein.
Length = 86
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +1
Query: 265 EPTNTSCPSCSAAIVTRVDHVPVTKTHLFAL--LLCLIGCCPCACIPY--CTDSCKDANH 432
EP C C VTR T+T L A ++ +IGC I Y C DS KD H
Sbjct: 17 EPHQVFCQKCQCNQVTR------TETQLGACWWVVFIIGCLLFWPICYWLCCDSSKDTMH 70
Query: 433 YCPNCNAYI 459
YCP+C +
Sbjct: 71 YCPSCGTLL 79
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +1
Query: 283 CPSCSAAIVTRVDHVPVTKTHLFALLLCLIGC---CPCACIPYCTDSCKDANHYCPNCNA 453
CP C I+T V T + L+C G C I C D KD +H CPNC
Sbjct: 36 CPKCQTTIMTSV----TTHIGMCWWLICFFGTFLFCWPILICLCFDVSKDVDHNCPNCGL 91
Query: 454 YIGS 465
+ +
Sbjct: 92 LLAT 95
>AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical
protein Y37D8A.26 protein.
Length = 88
Score = 35.1 bits (77), Expect = 0.030
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +1
Query: 283 CPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPNCNAYIG 462
C +C + T+ + V + + CL PC + + D +H CPNCN +G
Sbjct: 27 CTNCQETVTTKTEQV-FGMLNFALFITCLF--LPCFIVCFWCRCFMDVHHRCPNCNKSLG 83
>AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical
protein Y37D8A.8 protein.
Length = 79
Score = 35.1 bits (77), Expect = 0.030
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = +1
Query: 265 EPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPN 444
+P CP C +VT V++ L +L+ + + C +DA H+CPN
Sbjct: 11 KPYQEYCPRCRCTVVTVVEYEMGCFAWLIIILIIFVAFFLIYIL--CCIDIRDAIHHCPN 68
Query: 445 CNAYIGSYK 471
C + K
Sbjct: 69 CGMVLSRKK 77
>AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical
protein B0348.1 protein.
Length = 87
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 265 EPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPN 444
EP + CP C TR++ A + P C C S KD HYCP+
Sbjct: 17 EPYSEYCPKCQCNHTTRMESRR-GNCWWIAFFIGFFLFFPI-CYWLCCQSSKDTLHYCPS 74
Query: 445 CNAYIGS 465
C + +
Sbjct: 75 CGTLLAT 81
>Z78544-5|CAB01759.2| 324|Caenorhabditis elegans Hypothetical
protein K04G11.2 protein.
Length = 324
Score = 31.9 bits (69), Expect = 0.28
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 196 VPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRV 318
+PS+ +PPQ ++ P Q P TN++ S+++ T +
Sbjct: 61 LPSIFTSPPQTVISEAPPQSFTPSATNSTSDKTSSSLKTEL 101
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glutamate
receptor protein1 protein.
Length = 1025
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +1
Query: 337 KTHLFALLLCLIGCC----PCACIPYCTDSCKDANHYCPNCNAYIGSYK 471
+T LFA L C + PC+ +P S D H CP C+ +G ++
Sbjct: 968 ETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMGRFR 1016
>AY398504-1|AAQ96213.1| 324|Caenorhabditis elegans SEL-7 protein.
Length = 324
Score = 31.9 bits (69), Expect = 0.28
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 196 VPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRV 318
+PS+ +PPQ ++ P Q P TN++ S+++ T +
Sbjct: 61 LPSIFTSPPQTVISEAPPQSFTPSATNSTSDKTSSSLKTEL 101
>AL031265-2|CAE48506.1| 324|Caenorhabditis elegans Hypothetical
protein K04G11.2 protein.
Length = 324
Score = 31.9 bits (69), Expect = 0.28
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 196 VPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRV 318
+PS+ +PPQ ++ P Q P TN++ S+++ T +
Sbjct: 61 LPSIFTSPPQTVISEAPPQSFTPSATNSTSDKTSSSLKTEL 101
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +1
Query: 337 KTHLFALLLCLIGCC----PCACIPYCTDSCKDANHYCPNCNAYIGSYK 471
+T LFA L C + PC+ +P S D H CP C+ +G ++
Sbjct: 968 ETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMGRFR 1016
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 31.1 bits (67), Expect = 0.49
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Frame = +1
Query: 196 VPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLC-LI 372
+P TP QQ A Q + + +S C A + + V + +++
Sbjct: 323 MPQCTPQCVQQQTICAAACQPSCQSSCSSNAQCVQACLPSCESSCVQQQQPSVVVVQDSQ 382
Query: 373 GCCPCACIPYCTDSCKDANHYC-----PNCNAYIGS 465
CP AC P C+ C A + C P+C + GS
Sbjct: 383 SSCPSACQPSCSQQCIQAQNLCQSACQPSCQSSCGS 418
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 30.7 bits (66), Expect = 0.64
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 190 PAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCP 288
P P+ +PAPP Q V QQ PT+ S P
Sbjct: 414 PPKPTPSPAPPAQKAQPVTQQQASAPPTSPSAP 446
>U58753-5|AAC24434.2| 348|Caenorhabditis elegans Hypothetical
protein W03B1.6 protein.
Length = 348
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/96 (26%), Positives = 39/96 (40%)
Frame = +3
Query: 102 TENRFVWRALRTASTKSASVQQPDTARSIPGRSFRHPRAPPAVRYSCSGTTNGP*AHEH* 281
T+ + W A+ + S + +T RSIP RH P+ +Y + N A+
Sbjct: 76 TKKNYQWNINDVANLIAPSCEY-ETVRSIPMGWCRHKDLKPSGKYKIAMIGNSWTANHAS 134
Query: 282 LPFMQCGNRHQSRSRASD*NPPVCFASLPNRLLPMC 389
L + +CG + S + S C P L P C
Sbjct: 135 LVYQECGYQANSILQGSF---GYCEVLYPTTLRPHC 167
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 7/89 (7%)
Frame = +1
Query: 196 VPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVP------VTKTHLFAL 357
+P P QQ VP P + PSCS + V + P T + L
Sbjct: 238 MPRCLPTCIQQIQISVPLPPPAPRCDSMCMPSCSPSCVQQYSLCPQQCRPMCTNACVTNL 297
Query: 358 LLCL-IGCCPCACIPYCTDSCKDANHYCP 441
+ + C AC+P CT SC CP
Sbjct: 298 QVSRPVSQCLPACMPSCTSSC--VQSMCP 324
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = +1
Query: 247 AQQMGPEPTNTSC-PSCSAAIVTRVDHVPV-----TKTHLFALLLCLIGCCPCACIPYCT 408
A QM P P C P C ++ + R+ V + T + I C P AC+P C
Sbjct: 340 AVQMAPTPCAAQCMPLCESSCIARLSCVQTCMPACSPTCVQNYAAGPIQCAP-ACMPLCQ 398
Query: 409 DSC 417
+C
Sbjct: 399 PTC 401
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +1
Query: 274 NTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPNCN 450
N C SCS VT D T A ++ C C+P C +C + P+C+
Sbjct: 53 NCGCGSCSG-FVTCPDRCQPMCTQ--ACVMAKTSVCVDQCMPKCDSACINLVRSGPSCD 108
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 190 PAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAA 303
P S P VTVVP P P+++ PS S A
Sbjct: 298 PGTMSTVSGPTGSTVTVVPGSSTSPAPSSSPNPSSSPA 335
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 190 PAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAA 303
P S P VTVVP P P+++ PS S A
Sbjct: 505 PGTMSTVSGPTGSTVTVVPGSSTSPAPSSSPNPSSSPA 542
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 190 PAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAA 303
P S P VTVVP P P+++ PS S A
Sbjct: 505 PGTMSTVSGPTGSTVTVVPGSSTSPAPSSSPNPSSSPA 542
>AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical
protein T22B2.6 protein.
Length = 145
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 280 SCPSCSAAIVTRVDHVPVTKTHLFALLLC-LIGCCPCACIPYCTDSCKD 423
SC SCSA +V V V+ + + ++ C C+P C +C D
Sbjct: 19 SCSSCSAPVVAPAP-VAVSGYQPYGIAYYPVVPSCTAQCMPTCAPTCVD 66
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = +1
Query: 262 PEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCP 441
P P + P C + V VPVT T CC C C P CT++C +
Sbjct: 83 PPPCSCGTPGCMQCVQQTV-LVPVTTTT----------CCKC-CQPVCTNACTNGGGCSC 130
Query: 442 NC 447
C
Sbjct: 131 GC 132
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 364 CLIGCCPCACIPYCTDSCKDANHYCPNCNAYIGS 465
C+I C C +C +S + N CP C A+ G+
Sbjct: 19 CIIECGHSYC-RFCIESHLNINEKCPLCRAHTGN 51
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 27.9 bits (59), Expect = 4.5
Identities = 20/71 (28%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Frame = +1
Query: 196 VPSVTPAPPQQFVTVVPAQQMGPEPTNTSC-PSCSAAIVTRVDHVPVTKTHLFALLLCLI 372
VPS PA VP P P C P C + + + L C+
Sbjct: 373 VPSCMPACQPSCTNPVPLTTQAPVPVVNQCIPPCQPQCLQSCLEQHIQPQVVTQLPQCIP 432
Query: 373 GCCPCACIPYC 405
C P AC P C
Sbjct: 433 QCQP-ACEPQC 442
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 349 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 465
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 450 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 489
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 349 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 465
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 476 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 515
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 349 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 465
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 450 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 489
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 349 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 465
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 476 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 515
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 349 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 465
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 317 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 356
>U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical
protein F07F6.1 protein.
Length = 428
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 393 TSTWATTY*AKKQSKQVGFSHWHVIYSGDDCRTA*RAASVR 271
T ++T A KQS Q G+ +W +YS DD +T VR
Sbjct: 34 TPAKSSTGAAPKQSSQSGWDYWTRVYS-DDAQTTGTPRDVR 73
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 349 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 465
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 450 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 489
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 349 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 465
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 476 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 515
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = +1
Query: 199 PSVTPAPPQQFVTVVPAQQMGPEP--TNTSCPSCSAAIVTRVDHVPV 333
P + P P +V + GPE T CP C + D +PV
Sbjct: 100 PRMNPNDPNMVRGIVVLPRRGPEARATEIKCPECRKPTLVPADGLPV 146
>AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 4
protein.
Length = 523
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +1
Query: 190 PAVPSVTPAPPQ--QFVTVVPAQQMGPEP 270
P V + PAPPQ Q V A QM PEP
Sbjct: 20 PGVSTPEPAPPQIKQEVDYQDAHQMAPEP 48
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = +1
Query: 199 PSVTPAPPQQFVTVVPAQQMGPEP--TNTSCPSCSAAIVTRVDHVPV 333
P + P P +V + GPE T CP C + D +PV
Sbjct: 100 PRMNPNDPNMVRGIVVLPRRGPEARATEIKCPECRKPTLVPADGLPV 146
>Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical
protein C31C9.1a protein.
Length = 473
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = +3
Query: 81 NRNGP**TENRFVWRALRTASTKSASVQQPDTARSIPGRSFRHPRAPPAVRYSCSGTTNG 260
+RNG N F+ + S + + P + PG A P V + GTT
Sbjct: 394 SRNGTMYELNLFIADWIDYPSNTTVAPAAPTVTTTTPGTPSTAAPAAPTVTTTTPGTTTS 453
Query: 261 P*AH 272
P AH
Sbjct: 454 PSAH 457
>Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical
protein C31C9.1a protein.
Length = 473
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = +3
Query: 81 NRNGP**TENRFVWRALRTASTKSASVQQPDTARSIPGRSFRHPRAPPAVRYSCSGTTNG 260
+RNG N F+ + S + + P + PG A P V + GTT
Sbjct: 394 SRNGTMYELNLFIADWIDYPSNTTVAPAAPTVTTTTPGTPSTAAPAAPTVTTTTPGTTTS 453
Query: 261 P*AH 272
P AH
Sbjct: 454 PSAH 457
>U40943-5|AAK39235.2| 279|Caenorhabditis elegans Hypothetical
protein F47F2.3 protein.
Length = 279
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 379 CPCACIPYCTDSCKDA 426
C C+PYCT C DA
Sbjct: 107 CRDECMPYCTPQCLDA 122
>AF067607-7|AAF98613.1| 433|Caenorhabditis elegans Serpentine
receptor, class t protein59 protein.
Length = 433
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 364 CLIGCCPCACIPYCTDSCKDANHYCPNCNAYIG 462
C +G C CI + C D NH P +IG
Sbjct: 255 CWMGSCS-TCILLAANRCSDINHNLPIRKMFIG 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,819,829
Number of Sequences: 27780
Number of extensions: 250480
Number of successful extensions: 1124
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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