Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31502
         (663 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22175-2|CAA80131.2|  520|Caenorhabditis elegans Hypothetical pr...    54   7e-08
Z11115-20|CAA77460.2|  520|Caenorhabditis elegans Hypothetical p...    54   7e-08
Z99709-5|CAB16860.1|  246|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z69788-8|CAA93644.3|  483|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    29   2.9  

>Z22175-2|CAA80131.2|  520|Caenorhabditis elegans Hypothetical
           protein ZK637.1 protein.
          Length = 520

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 23/87 (26%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = +1

Query: 343 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 519
           ++  +SEK    + A+E  G+GRF   L  + G+   ++ M+++ +S I P+  C+  ++
Sbjct: 58  QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117

Query: 520 TQTKGWLNSIIFIGMMVGAYAWGSVAD 600
           +  +  + + +F GMM+ +  WG + D
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWGKICD 144


>Z11115-20|CAA77460.2|  520|Caenorhabditis elegans Hypothetical
           protein ZK637.1 protein.
          Length = 520

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 23/87 (26%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = +1

Query: 343 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 519
           ++  +SEK    + A+E  G+GRF   L  + G+   ++ M+++ +S I P+  C+  ++
Sbjct: 58  QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117

Query: 520 TQTKGWLNSIIFIGMMVGAYAWGSVAD 600
           +  +  + + +F GMM+ +  WG + D
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWGKICD 144


>Z99709-5|CAB16860.1|  246|Caenorhabditis elegans Hypothetical
           protein C47B2.5 protein.
          Length = 246

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +1

Query: 379 RAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWL 540
           R  EL G G      +A CGL STS E+ V+   F L        ++ Q +  L
Sbjct: 188 RGSELIGAGMVVNDWVAFCGLDSTSTELSVVESIFKLGEQGAPTSISNQLRDTL 241


>Z69788-8|CAA93644.3|  483|Caenorhabditis elegans Hypothetical
           protein F09A5.1 protein.
          Length = 483

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/65 (20%), Positives = 31/65 (47%)
 Frame = +1

Query: 406 RFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAW 585
           R  Y+ + +  +V+    +D  +++ +LP  Q   ++     G + ++  I  M+G+   
Sbjct: 5   RKDYISIVILFVVNLINNVDRYTIAGVLPDVQSYYNINDSMGGMIQTVFLISFMIGSPIC 64

Query: 586 GSVAD 600
           G + D
Sbjct: 65  GYLGD 69


>U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical
           protein K06A9.1c protein.
          Length = 825

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 26/93 (27%), Positives = 40/93 (43%)
 Frame = -2

Query: 404 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEXGPFSCRSPFTSQL*GFLGP 225
           P P SS     S  S     SG+       G+T S+  +  G  S  +  T  +     P
Sbjct: 118 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 174

Query: 224 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 126
           GS  T+  G ++ YG    + +S + G+ +TNS
Sbjct: 175 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 207


>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
           protein K06A9.1a protein.
          Length = 1032

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 26/93 (27%), Positives = 40/93 (43%)
 Frame = -2

Query: 404 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEXGPFSCRSPFTSQL*GFLGP 225
           P P SS     S  S     SG+       G+T S+  +  G  S  +  T  +     P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381

Query: 224 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 126
           GS  T+  G ++ YG    + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
           protein K06A9.1b protein.
          Length = 2232

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 26/93 (27%), Positives = 40/93 (43%)
 Frame = -2

Query: 404 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEXGPFSCRSPFTSQL*GFLGP 225
           P P SS     S  S     SG+       G+T S+  +  G  S  +  T  +     P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381

Query: 224 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 126
           GS  T+  G ++ YG    + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,661,933
Number of Sequences: 27780
Number of extensions: 333254
Number of successful extensions: 846
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)