BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31498
(707 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023838-1|AAZ86759.1| 455|Drosophila melanogaster LD13915p pro... 29 6.2
AE013599-2015|AAF58167.1| 441|Drosophila melanogaster CG8090-PA... 29 6.2
>BT023838-1|AAZ86759.1| 455|Drosophila melanogaster LD13915p
protein.
Length = 455
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 428 SRCDVICNAQRLAFKMQHCAMKKRRILKAL 517
SR D+IC +RLA ++ + KKR+I A+
Sbjct: 183 SRNDIICFERRLALTVEMLSAKKRKIAMAI 212
>AE013599-2015|AAF58167.1| 441|Drosophila melanogaster CG8090-PA
protein.
Length = 441
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 428 SRCDVICNAQRLAFKMQHCAMKKRRILKAL 517
SR D+IC +RLA ++ + KKR+I A+
Sbjct: 169 SRNDIICFERRLALTVEMLSAKKRKIAMAI 198
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,527,221
Number of Sequences: 53049
Number of extensions: 631412
Number of successful extensions: 1380
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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