Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31498
         (707 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.1  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   8.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   8.7  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   8.7  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 111 KHKHNKRPIVWSRN*HDFPLIFINTNNFSQH 19
           KH H  RPI  S+N H    +F+  + F Q+
Sbjct: 542 KHDHQGRPISISKNQH----LFVELDQFIQN 568


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 200 HCNRESPAYDINTSLYQITWP 138
           H  R+S + D+N    Q++WP
Sbjct: 86  HGRRQSRSMDLNAHREQMSWP 106


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 162 SVYVVCWALTVAVRSFLWINR 224
           +V+ +CW     +  + WI+R
Sbjct: 267 AVFFICWTPYYVMSLWYWIDR 287


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 449 YRLRRIENVIKAPTPSFNATFLK 381
           Y +R    ++K   PSF A F+K
Sbjct: 113 YAIRGNSAILKCVVPSFVADFVK 135


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
 Frame = +1

Query: 355 PLSPHSHGRFKNVALKLGVGAFITFSMRRNL*RPTLGVQNATLRD-EKASHIK 510
           P  PH H      A K GV      S    +    LG+Q    +D E+A  I+
Sbjct: 108 PYRPHPHNLVGKEACKQGVCTVEVSSENMTVTFANLGIQCVKKKDIEEALKIR 160


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
 Frame = +1

Query: 355 PLSPHSHGRFKNVALKLGVGAFITFSMRRNL*RPTLGVQNATLRD-EKASHIK 510
           P  PH H      A K GV      S    +    LG+Q    +D E+A  I+
Sbjct: 108 PYRPHPHNLVGKEACKQGVCTVEVSSENMTVTFANLGIQCVKKKDIEEALKIR 160


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,662
Number of Sequences: 438
Number of extensions: 4058
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)