Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31493
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   2.1  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   4.8  
AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal ...    23   8.3  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 129  MSMSFSNHLTPGRLRARPP 73
            +S++F+ H+TPG  R R P
Sbjct: 1393 ISLNFTEHMTPGTERIRLP 1411


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -3

Query: 377 RLCRTHYYLQKVSRQHMSNYYSYAAICVGGRTSCESVRVGATTSPISAVKQ 225
           R CR+ Y  Q+  R+H      ++ +C  GR S   V V  +TS ++A  Q
Sbjct: 388 RECRSTYVCQQCKRKH------HSKLCKIGRLS--EVEVVPSTSRLTATAQ 430


>AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal
           carrier protein A5 protein.
          Length = 211

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 129 MSMSFSNHLTPGRLRARPPI 70
           + +S  N LTP +++ARP +
Sbjct: 59  VEVSLGNQLTPTQVKARPKL 78


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,247
Number of Sequences: 2352
Number of extensions: 13442
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)