Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31493
         (649 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119126-1|AAM50986.1|  663|Drosophila melanogaster RE29544p pro...    30   3.1  
AE014296-1114|AAN12095.1|  127|Drosophila melanogaster CG32398-P...    30   3.1  
AE014134-1585|AAF52729.1|  663|Drosophila melanogaster CG18088-P...    30   3.1  

>AY119126-1|AAM50986.1|  663|Drosophila melanogaster RE29544p
           protein.
          Length = 663

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -3

Query: 644 TNNNIIKRKVLFVCIE*APKLLNRFEKFFHC 552
           T N IIKR +L +  E A KLLN  +K ++C
Sbjct: 101 TYNEIIKRHILHIDDEIAQKLLNFTDKDYNC 131


>AE014296-1114|AAN12095.1|  127|Drosophila melanogaster CG32398-PA
           protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 52  SFFYCLDGWTSSKSTWC*VVTEAHRH 129
           +FF CL  W +S STW    +E+HR+
Sbjct: 75  NFFVCLYIWAASSSTWRQQQSESHRN 100


>AE014134-1585|AAF52729.1|  663|Drosophila melanogaster CG18088-PA
           protein.
          Length = 663

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -3

Query: 644 TNNNIIKRKVLFVCIE*APKLLNRFEKFFHC 552
           T N IIKR +L +  E A KLLN  +K ++C
Sbjct: 101 TYNEIIKRHILHIDDEVAQKLLNFTDKDYNC 131


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,458,157
Number of Sequences: 53049
Number of extensions: 561831
Number of successful extensions: 995
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)