Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31490
         (305 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical pr...    38   0.001
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr...    29   0.85 
U39644-1|AAA80359.2|  393|Caenorhabditis elegans Hypothetical pr...    28   1.5  
Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical pr...    27   2.0  
CU457741-1|CAM36342.1|  347|Caenorhabditis elegans Hypothetical ...    27   2.0  
AC024799-9|AAK72312.1|  293|Caenorhabditis elegans Hypothetical ...    27   3.4  
AL032625-4|CAB63350.2|  792|Caenorhabditis elegans Hypothetical ...    26   6.0  
Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical pr...    25   7.9  
Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical pr...    25   7.9  

>U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical
           protein T09B4.8 protein.
          Length = 444

 Score = 37.9 bits (84), Expect = 0.001
 Identities = 16/45 (35%), Positives = 30/45 (66%)
 Frame = +1

Query: 169 QQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYXNDGKRYLDLF 303
           Q+V+ ++ + +P      YK  +L+T+G  Q+L+ ++GK+YLD F
Sbjct: 2   QRVQALRPL-LPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFF 45


>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
           protein K07E3.1 protein.
          Length = 1061

 Score = 28.7 bits (61), Expect = 0.85
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 118 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 234
           K+ P  + P+   G  YQQ++Q      PP + NAY+ P
Sbjct: 204 KVHPMPYHPQMNKGNHYQQLQQYT---QPPPVYNAYQPP 239


>U39644-1|AAA80359.2|  393|Caenorhabditis elegans Hypothetical
           protein T10E10.3 protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 192 SFHLFYLLVRRSRVRSGHEIRRRHFGRAVRSDDVEA*FCSSIS 64
           SFH   L   R+R R     R R    + RSDDV A   S+++
Sbjct: 197 SFHTCLLYYLRNRFRHFFPARTRSARNSTRSDDVPAPLLSNVT 239


>Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical
           protein F28C1.1 protein.
          Length = 672

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 41  QQRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK 175
           ++R  S+     ++ + ++S R  R K RRR    DR+RD R  K
Sbjct: 460 RERRRSRSRDRRRHRSRSTSRRRQRSKDRRRDRSRDRSRDERNEK 504


>CU457741-1|CAM36342.1|  347|Caenorhabditis elegans Hypothetical
           protein C42C1.1 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -1

Query: 170 WYEGPVYGLGTKSVGGILAV-LYVLTMSKHNFVPLLAIS 57
           W+ G + G+G  + GG+LA  L ++  S ++ V LL +S
Sbjct: 135 WWIGIIIGIGLYTAGGLLAYSLAIVATSFYHTVFLLVLS 173


>AC024799-9|AAK72312.1|  293|Caenorhabditis elegans Hypothetical
           protein Y49C4A.1 protein.
          Length = 293

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = -2

Query: 205 AACKLLSFVLLVGTKVPCTVWARNPSAAFW--PCCTF*RCRSIILFLY*PFRCVSL-LRR 35
           A+C  + F  L+    P TV   +    +   PC     CRSII F     R ++L   R
Sbjct: 57  ASCSYIGFTFLI-LIFPYTVQDLHFLIVYLALPCSNIAACRSIIAFFIVIERVMALYFPR 115

Query: 34  LQYVTLDLVPN 2
           +  ++++ VPN
Sbjct: 116 IYRISIERVPN 126


>AL032625-4|CAB63350.2|  792|Caenorhabditis elegans Hypothetical
           protein Y37H9A.3 protein.
          Length = 792

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -3

Query: 201 HVNSFHLFYLLVRRSRVRSGHEIRRRHFGRAV 106
           H+   H++Y+   +S  ++G   + R + RAV
Sbjct: 138 HLKQLHVYYMKAHKSAEQAGEGPKARRYKRAV 169


>Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +2

Query: 44  QRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK*NK*KEFTCRLQSRTP 223
           +R+ S+    E+    + S+ + R K  RR      +     +  ++   ++ R +SRTP
Sbjct: 226 RRSRSRTRSRERTSRRSRSKESPRSKRSRRSRSSSNSSSESDSSSSRSSSYSSRSRSRTP 285

Query: 224 IRSR 235
            RSR
Sbjct: 286 QRSR 289


>Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +2

Query: 44  QRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK*NK*KEFTCRLQSRTP 223
           +R+ S+    E+    + S+ + R K  RR      +     +  ++   ++ R +SRTP
Sbjct: 226 RRSRSRTRSRERTSRRSRSKESPRSKRSRRSRSSSNSSSESDSSSSRSSSYSSRSRSRTP 285

Query: 224 IRSR 235
            RSR
Sbjct: 286 QRSR 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,756,750
Number of Sequences: 27780
Number of extensions: 161660
Number of successful extensions: 545
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)