Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31484
(410 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin p... 30 0.75
AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin p... 30 0.75
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 29 0.99
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 1.7
U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical pr... 28 2.3
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 2.3
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 2.3
AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical... 28 2.3
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 5.3
U21319-1|AAC46673.2| 258|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 27 7.0
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical p... 27 7.0
U61947-2|AAB03135.1| 498|Caenorhabditis elegans Hypothetical pr... 27 7.0
U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z48716-3|CAA88599.1| 96|Caenorhabditis elegans Hypothetical pr... 26 9.2
AF040655-1|AAK84577.2| 678|Caenorhabditis elegans Hypothetical ... 26 9.2
>DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin
proteoglycan-4 protein.
Length = 782
Score = 29.9 bits (64), Expect = 0.75
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 372 QVLSHVSEEGTERLS-EAGEVSGPDAVCVRVNDVSGCTGITGDTGR*MGDNSG 217
++L H+SE+ TE S +GE+SG + N+ SG D GDNSG
Sbjct: 508 EILEHISEKSTEESSGSSGEMSGDGS----DNEASGEGSGEYDASGSSGDNSG 556
>AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin
proteoglycan protein 4 protein.
Length = 782
Score = 29.9 bits (64), Expect = 0.75
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 372 QVLSHVSEEGTERLS-EAGEVSGPDAVCVRVNDVSGCTGITGDTGR*MGDNSG 217
++L H+SE+ TE S +GE+SG + N+ SG D GDNSG
Sbjct: 508 EILEHISEKSTEESSGSSGEMSGDGS----DNEASGEGSGEYDASGSSGDNSG 556
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 29.5 bits (63), Expect = 0.99
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 209 PKPPEL-SPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDT 358
P PP + SP LP +P +P+T P +SPA + P++ T
Sbjct: 503 PAPPAIPSPAKLPTAPPPVEKPVTPSPSASPLPSPVSSPAPQLVQKPTTPT 553
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.7 bits (61), Expect = 1.7
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +2
Query: 101 GTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPL-T 277
GT +PT A + T + P +T P P +P PV+ P T
Sbjct: 513 GTIGTSPT-APANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTST 571
Query: 278 SLTLTQTASGPETSPASDNLSVPSSDT 358
+ T T T + +T+P + ++ PS+ T
Sbjct: 572 TTTTTTTTTTTQTTPTTPVVTTPSTIT 598
>U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical
protein R08C7.6 protein.
Length = 569
Score = 28.3 bits (60), Expect = 2.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 218 PELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVP 346
P++ P LPV + + S+ + + E P SD+ SVP
Sbjct: 344 PKMPPFVLPVETSVGCDNMNSVAIVHSEIDTEFRPMSDSQSVP 386
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 209 PKPPELSPIYLPVSPVMPVQPL-TSLTLTQTASGPETSPASDNLSVPSSDT 358
P P +P PV+ P T+ T T T + +T+P + ++ PS+ T
Sbjct: 669 PTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTIT 719
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 209 PKPPELSPIYLPVSPVMPVQPL-TSLTLTQTASGPETSPASDNLSVPSSDT 358
P P +P PV+ P T+ T T T + +T+P + ++ PS+ T
Sbjct: 725 PTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTIT 775
>AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical
protein Y116A8C.4 protein.
Length = 714
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 335 DCLKPAKFPDLTPSV*ELMTLAAAQASPG 249
D +KPA DL PSV + M L A SPG
Sbjct: 286 DKMKPAVLDDLVPSV-DFMGLVKAMISPG 313
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 4.0
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 227 SPIYLPVSPVMPVQPLTSLTLTQTAS----GPETSPASDNLSVPSSDT 358
S IYLP V+P +S+ L+ T S P+T PAS +++ ++ T
Sbjct: 502 SSIYLPQPAYPEVKPNSSVILSSTQSQNNTSPQTIPASASVTNSATST 549
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 387 LIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 268
L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 725 LLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 387 LIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 268
L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 725 LLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 387 LIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 268
L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 725 LLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 387 LIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 268
L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 725 LLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 27.1 bits (57), Expect = 5.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 263 VQPLTSLTLTQTASGPETSPASDNLSVPSSDTW 361
V P+T+ T SGP S N + SSD W
Sbjct: 846 VTPVTTTTTNMRESGPLLHENSHNQLLSSSDNW 878
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 27.1 bits (57), Expect = 5.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 263 VQPLTSLTLTQTASGPETSPASDNLSVPSSDTW 361
V P+T+ T SGP S N + SSD W
Sbjct: 846 VTPVTTTTTNMRESGPLLHENSHNQLLSSSDNW 878
>U21319-1|AAC46673.2| 258|Caenorhabditis elegans Hypothetical
protein C30G12.4 protein.
Length = 258
Score = 27.1 bits (57), Expect = 5.3
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +1
Query: 187 ASQASAVAQTAGIIAHLSAGIPGDACAAANVINSYTDGVRSGNFAGFRQSL-GPFFGH-V 360
ASQ + AQ+ G + +AGIPG A + + T G + F F + GP +
Sbjct: 162 ASQVT-FAQSGGGVQIDTAGIPGTAAGCLTLTLTCTAGTGNYAFMQFNNNQGGPAENQDM 220
Query: 361 GQNLNLINQLVTNPW 405
G +N + V W
Sbjct: 221 GMTINALANCVDGNW 235
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 26.6 bits (56), Expect = 7.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 61 CRVEFHYHCID*W 23
C E+HYHCI W
Sbjct: 2126 CTREYHYHCISRW 2138
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 26.6 bits (56), Expect = 7.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 61 CRVEFHYHCID*W 23
C E+HYHCI W
Sbjct: 2126 CTREYHYHCISRW 2138
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 26.6 bits (56), Expect = 7.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 205 VAQTAGIIAHLSAGIPGDACAAANVINSYTDGVRSGN 315
VAQ AG +A +SA G+ ++N D V S N
Sbjct: 779 VAQLAGAVAEISAYHHGEQSLMGTIVNLAQDYVGSNN 815
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 26.6 bits (56), Expect = 7.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 205 VAQTAGIIAHLSAGIPGDACAAANVINSYTDGVRSGN 315
VAQ AG +A +SA G+ ++N D V S N
Sbjct: 779 VAQLAGAVAEISAYHHGEQSLMGTIVNLAQDYVGSNN 815
>Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical
protein F35G12.9 protein.
Length = 135
Score = 26.6 bits (56), Expect = 7.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 61 CRVEFHYHCID*W 23
CR FH HCID W
Sbjct: 100 CRHAFHRHCIDKW 112
>U61947-2|AAB03135.1| 498|Caenorhabditis elegans Hypothetical
protein C06G3.6 protein.
Length = 498
Score = 26.6 bits (56), Expect = 7.0
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +1
Query: 43 NEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEIL 159
+++ R +++ KA+ +AW + DT+ + L++QE+L
Sbjct: 116 DDLGRTVNECKATMKSDKAWRVMKDTEIAEGQLSLQELL 154
>U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical
protein T05A12.3 protein.
Length = 655
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 170 PARATMQVKHQRWPKPPELSPIYLPVSPVMP 262
PA+ ++ Q+ P PP L P+ +P +P
Sbjct: 373 PAKKEVRKPFQKGPTPPPLIPVAIPGKKYLP 403
>Z48716-3|CAA88599.1| 96|Caenorhabditis elegans Hypothetical
protein F59B10.5 protein.
Length = 96
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 176 RATMQVKHQRWPKPPELSPIYLPVSPVMPVQP 271
R V ++ +P P E++P Y+P+ V+P
Sbjct: 42 RYERSVAYEDFPTPGEMTPKYVPIMDFAKVRP 73
>AF040655-1|AAK84577.2| 678|Caenorhabditis elegans Hypothetical
protein T24E12.5 protein.
Length = 678
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 187 ASQASAVAQTAGIIAHLSAGIPGDACAAANVINSYTDGVRSGNFAG 324
++ + A TAG++A +AG+ A V+ + GV +G G
Sbjct: 43 SAAGTGAASTAGVVAASAAGVGAGAVGLTLVLPAVLMGVGAGLIVG 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.130 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,287,601
Number of Sequences: 27780
Number of extensions: 196243
Number of successful extensions: 648
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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