Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31482
(370 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 44 8e-06
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 29 0.17
SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase |Sc... 29 0.23
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 29 0.30
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 27 0.93
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 27 1.2
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar... 26 1.6
SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual 24 6.5
SPAC607.09c |btn1||battenin CLN3 family protein|Schizosaccharomy... 24 8.6
SPAC26F1.05 |mug106||sequence orphan|Schizosaccharomyces pombe|c... 24 8.6
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 44.0 bits (99), Expect = 8e-06
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +2
Query: 224 FSSFVQMRGSIPSYWSQDISKMVPKPAISID 316
++S+VQ RGSIP WSQ+ S + PKP I ID
Sbjct: 282 YTSYVQHRGSIPLRWSQEFSNITPKPPIGID 312
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 29.5 bits (63), Expect = 0.17
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKPAISIDLRRS 328
SFVQ+RG++P +W + S P+IS LR S
Sbjct: 293 SFVQVRGTVPCFWEEQFSSWY-GPSISF-LRSS 323
>SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 29.1 bits (62), Expect = 0.23
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKPAISI 313
SF Q+RGSIP +W+ +++ + +P +S+
Sbjct: 254 SFTQIRGSIPMFWA-EVNDLHYRPLLSL 280
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 28.7 bits (61), Expect = 0.30
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKPAISIDLRRSV 331
S+ Q+RGSIP +W Q+ +M + ID+ RS+
Sbjct: 282 SYCQVRGSIPIFWEQEGVQMFGQ---KIDITRSL 312
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 27.1 bits (57), Expect = 0.93
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 262 LLVTRHLEDGTQASNID*PPEIRLQKYQEKHLN 360
LL T + ++D PP + QKY EKH N
Sbjct: 307 LLTTGGSDGSVNHYSLDEPPLLSQQKYHEKHPN 339
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 26.6 bits (56), Expect = 1.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -2
Query: 342 VFLQTDLRRSIDIAGLGTIFEMSCDQ*LGIXPLIC 238
+F++ R+S +I+G GT+ D+ I PL+C
Sbjct: 699 IFVKYFDRKSQEISGCGTLHVNKSDEIRSICPLLC 733
>SPBC19F5.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 26.2 bits (55), Expect = 1.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKP 301
S VQ RGS+P++W+ +++ + KP
Sbjct: 241 SHVQTRGSVPAFWA-EVNNLRYKP 263
>SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1029
Score = 24.2 bits (50), Expect = 6.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 79 YSFNNFY*KCVKPKQTVCLI 138
Y FY +CVKPK T L+
Sbjct: 324 YFLGCFYEECVKPKSTWALL 343
>SPAC607.09c |btn1||battenin CLN3 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 396
Score = 23.8 bits (49), Expect = 8.6
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -3
Query: 311 SILLAWVPSSRCL-VTSNLVLXLSFVQMS*ICKLTFLSLLFILFVQSFIHPQYIFRIRHI 135
SI VP R L +T ++L + +Q + ++ +LF++FV+ I + H
Sbjct: 284 SISFFTVPYLRTLAITQFIILLFTILQSALYLTSSYHFVLFLIFVEGLIGGTVYVNVYHS 343
Query: 134 KHT 126
T
Sbjct: 344 LQT 346
>SPAC26F1.05 |mug106||sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 115
Score = 23.8 bits (49), Expect = 8.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 82 NKFATIYITLFCSVLFYIVN 23
+KF I +T++C LF+ N
Sbjct: 37 HKFDCIVVTIYCGCLFWFSN 56
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,413,252
Number of Sequences: 5004
Number of extensions: 24476
Number of successful extensions: 68
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 116121426
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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