Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31482
(370 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83220-2|CAB05701.2| 905|Caenorhabditis elegans Hypothetical pr... 44 3e-05
Z82077-5|CAB63333.1| 783|Caenorhabditis elegans Hypothetical pr... 30 0.45
Z81072-5|CAB03020.1| 591|Caenorhabditis elegans Hypothetical pr... 29 1.0
AF016668-8|AAZ91349.1| 296|Caenorhabditis elegans Serpentine re... 26 7.3
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 26 9.7
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 26 9.7
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 26 9.7
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 26 9.7
AL132951-11|CAN86614.1| 502|Caenorhabditis elegans Hypothetical... 26 9.7
AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin ... 26 9.7
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 26 9.7
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 26 9.7
>Z83220-2|CAB05701.2| 905|Caenorhabditis elegans Hypothetical
protein C34B7.2 protein.
Length = 905
Score = 44.4 bits (100), Expect = 3e-05
Identities = 23/34 (67%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Frame = +2
Query: 221 RFSSFVQMRGSIPSYWSQDISK--MVPKPAISID 316
RFSSFVQMRGS+P WSQD S +V KP I ID
Sbjct: 286 RFSSFVQMRGSVPMRWSQDPSTRGVVGKPLILID 319
>Z82077-5|CAB63333.1| 783|Caenorhabditis elegans Hypothetical
protein W09C5.7 protein.
Length = 783
Score = 30.3 bits (65), Expect = 0.45
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQ 274
SFVQ RGSIP +WSQ
Sbjct: 272 SFVQCRGSIPVFWSQ 286
>Z81072-5|CAB03020.1| 591|Caenorhabditis elegans Hypothetical
protein F30A10.6 protein.
Length = 591
Score = 29.1 bits (62), Expect = 1.0
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 227 SSFVQMRGSIPSYWSQ 274
+SFVQ+RGSIP W+Q
Sbjct: 260 TSFVQLRGSIPLLWTQ 275
>AF016668-8|AAZ91349.1| 296|Caenorhabditis elegans Serpentine
receptor, class t protein41 protein.
Length = 296
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -3
Query: 242 FVQMS*ICKLTFLSLLFILFVQSFIHPQYIFRIRHIKHTVCFGLTHF 102
F+Q + IC + F++ + +++Q F ++ I HI + G F
Sbjct: 203 FLQSTLICMVNFVAAMIYVYMQFFPVADFVIVIGHISWQLGHGCPAF 249
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQ 274
S +Q+RGSIP +W Q
Sbjct: 242 SLLQIRGSIPLFWEQ 256
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQ 274
S +Q+RGSIP +W Q
Sbjct: 242 SLLQIRGSIPLFWEQ 256
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQ 274
S +Q+RGSIP +W Q
Sbjct: 242 SLLQIRGSIPLFWEQ 256
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQ 274
S +Q+RGSIP +W Q
Sbjct: 242 SLLQIRGSIPLFWEQ 256
>AL132951-11|CAN86614.1| 502|Caenorhabditis elegans Hypothetical
protein JC8.10c protein.
Length = 502
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQ 274
S +Q+RGSIP +W Q
Sbjct: 242 SLLQIRGSIPLFWEQ 256
>AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin
UNC-26C protein.
Length = 502
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQ 274
S +Q+RGSIP +W Q
Sbjct: 242 SLLQIRGSIPLFWEQ 256
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQ 274
S +Q+RGSIP +W Q
Sbjct: 242 SLLQIRGSIPLFWEQ 256
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQ 274
S +Q+RGSIP +W Q
Sbjct: 242 SLLQIRGSIPLFWEQ 256
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,685,783
Number of Sequences: 27780
Number of extensions: 133073
Number of successful extensions: 337
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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