Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31479
         (719 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA ...    34   0.22 
AY060432-1|AAL25471.1|  351|Drosophila melanogaster LD44720p pro...    32   0.68 
AE014297-1891|AAN13617.1|  351|Drosophila melanogaster CG7530-PC...    32   0.68 
AE014297-1890|AAF55092.1|  351|Drosophila melanogaster CG7530-PB...    32   0.68 
AE014297-1889|AAF55091.1|  351|Drosophila melanogaster CG7530-PA...    32   0.68 

>AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA
           protein.
          Length = 1667

 Score = 33.9 bits (74), Expect = 0.22
 Identities = 18/48 (37%), Positives = 28/48 (58%)
 Frame = +2

Query: 287 PTLKMSPFSCNKCDSCCRSSEPSIEPLSSRRKSAVEANMHGLGHSYSI 430
           P  ++   SC+KC    R+   +IEPL +R  SA+EA M  L  +Y++
Sbjct: 74  PVCELGKHSCSKCQPY-RADRGTIEPLKTRLNSAIEA-MDELTRTYAL 119


>AY060432-1|AAL25471.1|  351|Drosophila melanogaster LD44720p
           protein.
          Length = 351

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = -1

Query: 527 KLCLAWIFWWQQVLCLTLLHPLGIFQENGLPI-QLNMSALSHACXXXXLTSCVMIRVLCL 351
           K+CL  IFWW         H  G     GL I  L    L  +     L  C+++   CL
Sbjct: 104 KMCLQSIFWWTNETINIWSHLAGCILFIGLTIFDLQFLRLHASLSDQVLVVCLLV-CFCL 162

Query: 350 APMNGSSYHIYCRRME 303
             +  + YHI+  + E
Sbjct: 163 CMLMSAIYHIFSCKSE 178


>AE014297-1891|AAN13617.1|  351|Drosophila melanogaster CG7530-PC,
           isoform C protein.
          Length = 351

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = -1

Query: 527 KLCLAWIFWWQQVLCLTLLHPLGIFQENGLPI-QLNMSALSHACXXXXLTSCVMIRVLCL 351
           K+CL  IFWW         H  G     GL I  L    L  +     L  C+++   CL
Sbjct: 104 KMCLQSIFWWTNETINIWSHLAGCILFIGLTIFDLQFLRLHASLSDQVLVVCLLV-CFCL 162

Query: 350 APMNGSSYHIYCRRME 303
             +  + YHI+  + E
Sbjct: 163 CMLMSAIYHIFSCKSE 178


>AE014297-1890|AAF55092.1|  351|Drosophila melanogaster CG7530-PB,
           isoform B protein.
          Length = 351

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = -1

Query: 527 KLCLAWIFWWQQVLCLTLLHPLGIFQENGLPI-QLNMSALSHACXXXXLTSCVMIRVLCL 351
           K+CL  IFWW         H  G     GL I  L    L  +     L  C+++   CL
Sbjct: 104 KMCLQSIFWWTNETINIWSHLAGCILFIGLTIFDLQFLRLHASLSDQVLVVCLLV-CFCL 162

Query: 350 APMNGSSYHIYCRRME 303
             +  + YHI+  + E
Sbjct: 163 CMLMSAIYHIFSCKSE 178


>AE014297-1889|AAF55091.1|  351|Drosophila melanogaster CG7530-PA,
           isoform A protein.
          Length = 351

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = -1

Query: 527 KLCLAWIFWWQQVLCLTLLHPLGIFQENGLPI-QLNMSALSHACXXXXLTSCVMIRVLCL 351
           K+CL  IFWW         H  G     GL I  L    L  +     L  C+++   CL
Sbjct: 104 KMCLQSIFWWTNETINIWSHLAGCILFIGLTIFDLQFLRLHASLSDQVLVVCLLV-CFCL 162

Query: 350 APMNGSSYHIYCRRME 303
             +  + YHI+  + E
Sbjct: 163 CMLMSAIYHIFSCKSE 178


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,857,951
Number of Sequences: 53049
Number of extensions: 861868
Number of successful extensions: 2280
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2278
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)