Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31473
         (406 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     51   1e-08
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   3.2  
AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse t...    23   5.6  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 51.2 bits (117), Expect = 1e-08
 Identities = 25/73 (34%), Positives = 46/73 (63%)
 Frame = +3

Query: 93  MLVTLKTLQQQTFQIEIDPEETXKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
           M + +KTL  +T  +E++P +T + +K KI+ ++G     D QRLI+AGK L D   ++ 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58

Query: 273 YNIDEKKFIVIMV 311
           YNI ++  + +++
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 51.2 bits (117), Expect = 1e-08
 Identities = 25/73 (34%), Positives = 46/73 (63%)
 Frame = +3

Query: 93  MLVTLKTLQQQTFQIEIDPEETXKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
           M + +KTL  +T  +E++P +T + +K KI+ ++G     D QRLI+AGK L D   ++ 
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 134

Query: 273 YNIDEKKFIVIMV 311
           YNI ++  + +++
Sbjct: 135 YNIQKESTLHLVL 147



 Score = 51.2 bits (117), Expect = 1e-08
 Identities = 25/73 (34%), Positives = 46/73 (63%)
 Frame = +3

Query: 93  MLVTLKTLQQQTFQIEIDPEETXKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 272
           M + +KTL  +T  +E++P +T + +K KI+ ++G     D QRLI+AGK L D   ++ 
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 210

Query: 273 YNIDEKKFIVIMV 311
           YNI ++  + +++
Sbjct: 211 YNIQKESTLHLVL 223


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 121 CCKVFSVTNIFTLFLLY 71
           CC++F +TN    F+LY
Sbjct: 413 CCQLFFMTNFGINFILY 429


>AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 131

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 279 CCKNLFCCRPEEFFPHK 229
           CC++L   R   FFP +
Sbjct: 26  CCRSLISTRQHGFFPRR 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 365,553
Number of Sequences: 2352
Number of extensions: 5613
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)