Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31472
         (600 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024200-17|AAF36002.2|  432|Caenorhabditis elegans Hypothetical...   111   4e-25
Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical pr...    32   0.36 
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro...    29   2.5  
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical...    29   2.5  
U42832-2|AAA83572.1|  558|Caenorhabditis elegans Udp-glucuronosy...    29   3.3  
AF025464-8|AAB71019.1|  714|Caenorhabditis elegans Hypothetical ...    29   3.3  
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    28   4.4  

>AC024200-17|AAF36002.2|  432|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.1 protein.
          Length = 432

 Score =  111 bits (267), Expect = 4e-25
 Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
 Frame = +3

Query: 3   YMMLHGRTRPTRVGQKVRSKEESIKNNLKQYGTESKYIDILVSDFSLP-LWRDGVKFDAM 179
           Y     + R +R G   R + ESIK N +QY +ES+++ +L++D S   +W    KFDA+
Sbjct: 238 YQTARAQGRSSRQGVGQRGESESIKANFEQYKSESQFLGVLIADSSKHGIWSCNAKFDAI 297

Query: 180 ITDPPYGVREPTEKIGIERNNYTLSEEHLTNHIPSKVEYGLPHIYSDLLNFAARHLEMNG 359
           + DPPYGVRE   K  ++      +EE++      K EY L   + DLLN +AR L +NG
Sbjct: 298 VADPPYGVREKARKT-VKNKKVDTTEEYV--QYQQKEEYDLEAAFCDLLNLSARLLVING 354

Query: 360 RLVCWFPVIRADYQDEQLPSHPCL 431
           R+  W+PVI  +Y  E LP+HP +
Sbjct: 355 RISFWYPVILENYCAENLPNHPAM 378



 Score = 32.7 bits (71), Expect = 0.21
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = +2

Query: 434 LIANSEQILTKLTARRLLTYEKI 502
           LI+N EQ LT+ T+RRLL+Y KI
Sbjct: 380 LISNCEQPLTRKTSRRLLSYRKI 402


>Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical
           protein F11E6.7 protein.
          Length = 1011

 Score = 31.9 bits (69), Expect = 0.36
 Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
 Frame = +3

Query: 45  QKVRSKEESIKNNLKQYGTESKYIDILVSDFSLPLWRDGVKFDAMITDPPYGVREPT-EK 221
           +K   K+ES++N  +Q   E K +D  +SD  L    + ++ + ++  PP   R P+  +
Sbjct: 519 EKTDDKKESVQNIPEQEAAEKKEVDTTISDKRLSDTEEAIE-ENIVKSPPKTPRTPSILR 577

Query: 222 IGIERNNYTLSEEHLTNHIPSKVEYGLPHIYSDLLN 329
           +G      + S   +T    ++V +G   +  D+++
Sbjct: 578 VG---KRMSTSSSPMTERKRNRVHFGEESLPVDVVS 610


>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
           preproprotein protein.
          Length = 1042

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 192 PYGVREPTEKIGIERNNYTLSEEHLTNHI 278
           P+ +R+  E+IGI+  NY L  +   +H+
Sbjct: 50  PFQIRDKNERIGIDTRNYFLKAQEHYSHV 78


>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
           protein Y37D8A.13 protein.
          Length = 1042

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 192 PYGVREPTEKIGIERNNYTLSEEHLTNHI 278
           P+ +R+  E+IGI+  NY L  +   +H+
Sbjct: 50  PFQIRDKNERIGIDTRNYFLKAQEHYSHV 78


>U42832-2|AAA83572.1|  558|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein57 protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -2

Query: 242 IVTLYTNLLCWFANAVRWIGNHCVEFNSIPPERQRKITDQYINVFR 105
           I+ LY N +C+F   +  +G   V  +S+   R R + +   N+FR
Sbjct: 196 ILNLYKNSVCYFQEMIAQLGLPAV--SSLVSSRHRLLDEPITNIFR 239


>AF025464-8|AAB71019.1|  714|Caenorhabditis elegans Hypothetical
           protein F53G2.1 protein.
          Length = 714

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 238 TITLYLRSTSQITYLRKWNTAFLISTVTC 324
           TI +YLRS S+I+   K N  F I+ ++C
Sbjct: 663 TIRIYLRSISKISRQFKCNLIFTITKISC 691


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 22/83 (26%), Positives = 34/83 (40%)
 Frame = +3

Query: 36  RVGQKVRSKEESIKNNLKQYGTESKYIDILVSDFSLPLWRDGVKFDAMITDPPYGVREPT 215
           +  +KV+   + I   LK+ G         V+ FS        K D    D P  V    
Sbjct: 577 KAAEKVQLHIDEIAKYLKERGMSISAEKSTVTVFSCDPKEHKTKPDIYWMDDPIPVINAP 636

Query: 216 EKIGIERNNYTLSEEHLTNHIPS 284
           + +GI  N  T +++H+ N I S
Sbjct: 637 KLLGITLNTMTGTKDHVGNAIKS 659


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,883,847
Number of Sequences: 27780
Number of extensions: 292492
Number of successful extensions: 802
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)