Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31470
(663 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr ... 50 4e-07
SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1 |Schiz... 46 5e-06
SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces p... 44 2e-05
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 34 0.016
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 31 0.15
SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit Alp4|... 30 0.34
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 28 1.0
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.0
SPAC1071.11 |||NADH-dependent flavin oxidoreductase |Schizosacch... 27 3.2
SPBC1105.17 |cnp1|sim2|CENP-A|Schizosaccharomyces pombe|chr 2|||... 27 3.2
SPBC342.06c |rtt109|kat11|RTT109 family histone lysine acetyltra... 26 4.2
SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+ antip... 26 5.6
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 26 5.6
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 25 7.4
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 7.4
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 25 9.7
>SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 49.6 bits (113), Expect = 4e-07
Identities = 32/84 (38%), Positives = 43/84 (51%)
Frame = +2
Query: 158 TWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGILAAKCGALVTLTDSLTLPRSLRHL 337
TW + LA Y++ Q G+RVLELG GTGL IL AK G++V TD T +
Sbjct: 152 TWEAGMALAEYIY-QHPVQSGMRVLELGAGTGLVSILCAKMGSIVLATDGDT------KV 204
Query: 338 SACCEANGLVPNRDLQIVGLTWGL 409
N + N D+ + L WG+
Sbjct: 205 CDGVRENARLNNCDINVKKLLWGV 228
>SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 255
Score = 46.0 bits (104), Expect = 5e-06
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Frame = +2
Query: 146 YSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGILAAKCGALVTLTDSLTLPRS 325
++ Y W S LA Y+ +R +VLELG G GLP I++A GA ++ P
Sbjct: 53 WAHYLWNSGIELANYIDKNPDTVRAKKVLELGAGAGLPSIVSAFDGAKFVVSTDYPDPAL 112
Query: 326 LRHLSACCEANGLVPNRDLQIVGLTWGLFLGDL------HNLRPVDLILASDCFYEPSQF 487
+ +L + + ++ + VG WG + ++ + D++L SD + ++
Sbjct: 113 IDNLEHNVKQYAEIASK-ISAVGYLWGSNIKEVMSNAGFKDNEVFDILLLSDLVFNHTEH 171
Query: 488 EEVLSTVAYLLEG 526
+++ + +EG
Sbjct: 172 SKLIKSCKMAIEG 184
>SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 303
Score = 44.0 bits (99), Expect = 2e-05
Identities = 50/159 (31%), Positives = 68/159 (42%), Gaps = 8/159 (5%)
Frame = +2
Query: 152 FYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGILAA-KCGALVTLTDSLTLPRSL 328
F TW SAPLL+ L + LELG GTGL GI AA + G V TD LP +
Sbjct: 114 FKTWGSAPLLSANLPKWEDLSNSINALELGAGTGLVGISAAIQLGWQVVCTD---LPDIV 170
Query: 329 RHLSACCEANGLVPNRDLQIVG---LTWGLFLGDLHN----LRPVDLILASDCFYEPSQF 487
++ + N + + V L W D + ++P I+ASDC YE + F
Sbjct: 171 ENMQYNVDYNSELIQQYAGSVSCHVLDWMNPPDDDNRPSWLIKPFQRIIASDCIYE-THF 229
Query: 488 EEVLSTVAYLLEGTDARFLCSYQERSTDWSIEALLEEVG 604
E+ + D + Y R T LEE+G
Sbjct: 230 GELAIALFRKYLAKDGIVITEYPLRETH------LEEIG 262
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 34.3 bits (75), Expect = 0.016
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -1
Query: 582 SIDQSVLRSW*EHKKRASVPSSRYATVDSTSSNCDGS*KQSDARIRSTGRK 430
+++ + L SW H KR S+ Y + TSS DGS K +D I T R+
Sbjct: 17 TVESNSLLSWQLHVKRKSIKFDIYHKKNDTSSLLDGSNKNTDRSILHTKRQ 67
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 31.1 bits (67), Expect = 0.15
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 206 RHI-RGLRVLELGCGTGLPGILAAKCGA 286
+HI G VL++GCGTG+ + AK GA
Sbjct: 251 KHIFAGKTVLDVGCGTGILSMFCAKAGA 278
>SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit
Alp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 29.9 bits (64), Expect = 0.34
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 383 QIVGLTWGLFLGDLHNLRPVDLILASDCFYEPSQFEEVLSTVAYLLE 523
+++ WG F+G+L N R VD ++ + + +E + T + LL+
Sbjct: 655 EVIETHWGKFMGELENARTVDNLMQEHIDFLDTCLKECMLTNSRLLK 701
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 200 QRRHI-RGLRVLELGCGTGLPGILAAKCGA 286
Q H+ R VL++GCGTG+ + A+ GA
Sbjct: 48 QNPHLFRDKIVLDVGCGTGILSMFCARAGA 77
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 28.3 bits (60), Expect = 1.0
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = -1
Query: 600 TSSSRASIDQSVLRSW*EHKKRASVPSSRYATVDSTSSNCDGS*KQSDARIRSTGRKLCR 421
+SSS +S S L S ++ PS+ ++ S+SS+ S K S + +S+ R R
Sbjct: 116 SSSSSSSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSR 175
Query: 420 SPKNK 406
+ ++
Sbjct: 176 TTSHR 180
>SPAC1071.11 |||NADH-dependent flavin oxidoreductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 244
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 63 FSAQDPLQTATLE-VNIWRLLSRSYCQPVIRFTRG 164
FS + TA+ + VN +RLL R + QPV+ T G
Sbjct: 25 FSNFNRYSTASHDNVNAFRLLMRRFAQPVVIITSG 59
>SPBC1105.17 |cnp1|sim2|CENP-A|Schizosaccharomyces pombe|chr
2|||Manual
Length = 120
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 261 PGSPVPQPNSNTLRPRICRLC-VHKYQAS 178
PG P+P+P RP L + KYQ S
Sbjct: 10 PGDPIPRPRKKRYRPGTTALREIRKYQRS 38
>SPBC342.06c |rtt109|kat11|RTT109 family histone lysine
acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 369
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 536 RFLCSYQERSTDWSIEALLEEVG-TQRCTSG 625
R+LC Q+ +D S+E + + Q C+SG
Sbjct: 223 RYLCELQDEKSDMSVEEFWDTLTYRQECSSG 253
>SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+
antiporter Sod22|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 25.8 bits (54), Expect = 5.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 303 SVRVTSAPHFAASIPGSPVPQPNSNTLRPRI 211
S R + AP A S GSPV + N RP I
Sbjct: 719 SRRPSRAPSAAVSSEGSPVEEDNEAQHRPNI 749
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 256 AGNTRREVRSARNPHRQSNITEIASSPFCL 345
AGNT S N + ++N+T AS P L
Sbjct: 84 AGNTNTPTTSNSNQNLENNVTSAASMPAIL 113
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = -1
Query: 297 RVTSAPHFAASIPGSPVPQPNSNTLRPRICRLCVHKY 187
++ S+P +++P P P+S P I R+ K+
Sbjct: 65 QIDSSPKIPSAVPHISTPNPSSGASTPNIKRVSDFKF 101
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.4 bits (53), Expect = 7.4
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = -1
Query: 648 SFH*VSPGPEVHL*VPTSSSRASIDQSVLRSW*EHKKRASVPSSRYATVDSTSSNCDGS 472
SF+ S GP PTSSS + QS+ K S P+ +TV TSS+ D S
Sbjct: 635 SFNVNSVGPSSSQTTPTSSSSITGSQSL--------KETSSPAYVSSTVSYTSSSVDSS 685
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/42 (26%), Positives = 25/42 (59%)
Frame = +1
Query: 211 YSRSESVGVRLRNRTAGNTRREVRSARNPHRQSNITEIASSP 336
+ E+ ++N+T RE++S+++ H Q++ ++SSP
Sbjct: 725 FQTRETTSPSVQNKTPTKYHRELKSSKDGHEQAS-PLVSSSP 765
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,580,758
Number of Sequences: 5004
Number of extensions: 52047
Number of successful extensions: 172
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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