Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31470
(663 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical pr... 67 9e-12
CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical... 53 2e-07
CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical... 48 6e-06
Z93394-6|CAB61034.1| 766|Caenorhabditis elegans Hypothetical pr... 38 0.006
AL117203-24|CAB61043.1| 766|Caenorhabditis elegans Hypothetical... 38 0.006
Z12017-8|CAA78050.3| 371|Caenorhabditis elegans Hypothetical pr... 35 0.045
Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical pr... 35 0.059
U97194-6|AAB52451.2| 244|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z81581-9|CAN86610.1| 307|Caenorhabditis elegans Hypothetical pr... 29 3.9
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 28 5.1
>U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical
protein W06B4.2 protein.
Length = 521
Score = 67.3 bits (157), Expect = 9e-12
Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 8/163 (4%)
Frame = +2
Query: 155 YTWPSAPLLAWYLWTQRRHIRGLRVLELGCG-TGLPGILAAKCGAL-VTLTDSLTLPRSL 328
+ WP A + + +L + + I VLE+G G TG+ G+ AK GA V +TD L +L
Sbjct: 11 HAWPCAQVFSDFLCSNQELIEDKLVLEIGAGATGVCGLTTAKLGAANVWMTDHPKLEAAL 70
Query: 329 RHLSACCEANGLVPNRDLQIVGLTWGLFLG-----DLHNLRPVDLILASDCFYEPSQFEE 493
L EANG+ + GL W D R +D+I+ASD F++PS F
Sbjct: 71 ETLQRNIEANGVAEK--CIVTGLDWESRASVSAVCDQIGDRHLDVIIASDVFFDPSTFCP 128
Query: 494 VLSTVAYLL-EGTDARFLCSYQERSTDWSIEALLEEVGTQRCT 619
++ T A LL + A +YQ R +W+ L + R T
Sbjct: 129 LIDTFAQLLIKFEHATIWFAYQLRDDNWTCAPYLSKYPFLRAT 171
>CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical
protein C42C1.13b protein.
Length = 206
Score = 53.2 bits (122), Expect = 2e-07
Identities = 41/126 (32%), Positives = 60/126 (47%)
Frame = +2
Query: 161 WPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGILAAKCGALVTLTDSLTLPRSLRHLS 340
W SA + Y + + G +VLELG GTG+ GI A GA V +TD LP L +
Sbjct: 35 WDSALMTIHYFFKYPKPFEGKKVLELGSGTGVGGIALAALGADVIITD---LPERLALIE 91
Query: 341 ACCEANGLVPNRDLQIVGLTWGLFLGDLHNLRPVDLILASDCFYEPSQFEEVLSTVAYLL 520
EAN + +++ L W D +D++LA DC Y S + +++ LL
Sbjct: 92 KNVEANRKLTGNRIKVQVLDW---TKD-RIPEGLDMVLAIDCVYYNSTIDPLIT----LL 143
Query: 521 EGTDAR 538
DA+
Sbjct: 144 NDCDAK 149
>CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical
protein C42C1.13a protein.
Length = 167
Score = 48.0 bits (109), Expect = 6e-06
Identities = 38/117 (32%), Positives = 56/117 (47%)
Frame = +2
Query: 188 YLWTQRRHIRGLRVLELGCGTGLPGILAAKCGALVTLTDSLTLPRSLRHLSACCEANGLV 367
Y + + G +VLELG GTG+ GI A GA V +TD LP L + EAN +
Sbjct: 5 YFFKYPKPFEGKKVLELGSGTGVGGIALAALGADVIITD---LPERLALIEKNVEANRKL 61
Query: 368 PNRDLQIVGLTWGLFLGDLHNLRPVDLILASDCFYEPSQFEEVLSTVAYLLEGTDAR 538
+++ L W D +D++LA DC Y S + +++ LL DA+
Sbjct: 62 TGNRIKVQVLDW---TKD-RIPEGLDMVLAIDCVYYNSTIDPLIT----LLNDCDAK 110
>Z93394-6|CAB61034.1| 766|Caenorhabditis elegans Hypothetical
protein Y48E1C.1b protein.
Length = 766
Score = 37.9 bits (84), Expect = 0.006
Identities = 46/164 (28%), Positives = 68/164 (41%), Gaps = 15/164 (9%)
Frame = +2
Query: 161 WPSAPLLAWYLWTQRRHIRG-----------LRVLELGCG-TGLPGILAAKC---GALVT 295
WP + LAW + I G R+LELG G GL IL A C + V
Sbjct: 163 WPGSEALAWTILRDPNKILGPSLGDGDGGGHRRILELGAGFLGLSSILIA-CKVPDSSVW 221
Query: 296 LTDSLTLPRSLRHLSACCEANGLVPNRDLQIVGLTWGLFLGDLHNLRPVDLILASDCFYE 475
+TD S+R L +N + +R + L WG +L D ILA+DC +
Sbjct: 222 VTDGNM--ESVRSLEKIRNSNSSL-DRCCHVRQLIWGA--QELQQQHTFDTILAADCVFF 276
Query: 476 PSQFEEVLSTVAYLLEGTDARFLCSYQERSTDWSIEALLEEVGT 607
E ++ + L + L S + + S++ L+ VGT
Sbjct: 277 SEHHESLMKCIHSHLRPSGRAILSSPRRKQ---SLQKFLDYVGT 317
>AL117203-24|CAB61043.1| 766|Caenorhabditis elegans Hypothetical
protein Y48E1C.1b protein.
Length = 766
Score = 37.9 bits (84), Expect = 0.006
Identities = 46/164 (28%), Positives = 68/164 (41%), Gaps = 15/164 (9%)
Frame = +2
Query: 161 WPSAPLLAWYLWTQRRHIRG-----------LRVLELGCG-TGLPGILAAKC---GALVT 295
WP + LAW + I G R+LELG G GL IL A C + V
Sbjct: 163 WPGSEALAWTILRDPNKILGPSLGDGDGGGHRRILELGAGFLGLSSILIA-CKVPDSSVW 221
Query: 296 LTDSLTLPRSLRHLSACCEANGLVPNRDLQIVGLTWGLFLGDLHNLRPVDLILASDCFYE 475
+TD S+R L +N + +R + L WG +L D ILA+DC +
Sbjct: 222 VTDGNM--ESVRSLEKIRNSNSSL-DRCCHVRQLIWGA--QELQQQHTFDTILAADCVFF 276
Query: 476 PSQFEEVLSTVAYLLEGTDARFLCSYQERSTDWSIEALLEEVGT 607
E ++ + L + L S + + S++ L+ VGT
Sbjct: 277 SEHHESLMKCIHSHLRPSGRAILSSPRRKQ---SLQKFLDYVGT 317
>Z12017-8|CAA78050.3| 371|Caenorhabditis elegans Hypothetical
protein R08D7.4 protein.
Length = 371
Score = 35.1 bits (77), Expect = 0.045
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Frame = +2
Query: 224 RVLELGCGTGLPGILAAKCG-ALVTLTD------SLTLPRSLRHLSACCEANGLVPNRDL 382
R+LELG G G+ GI AK VTLTD +L ++ + N
Sbjct: 188 RILELGSGCGVSGIAIAKMNDCCVTLTDYDDNVLNLLEENIAKNDLKSDTEDSSANNNQA 247
Query: 383 QIVGLTWGLFLGDLHNLR-PVDLILASDCFYEPSQFEEVLSTVAYLLEGTDARFL-CSYQ 556
+ L W F D + P DLI+A+D Y+ + + + + LL + A + C+ +
Sbjct: 248 TVRSLNWCDF--DFSEWKEPTDLIIAADVVYDTALLASLCNVLNLLLRHSKAAIVACTRR 305
Query: 557 ERST 568
S+
Sbjct: 306 NESS 309
>Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical
protein K01A11.2 protein.
Length = 229
Score = 34.7 bits (76), Expect = 0.059
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = +2
Query: 152 FYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGILAAKCGA 286
F W L Y+ + G VLELGCG LP IL A GA
Sbjct: 54 FKIWECTVDLCDYIEENQTLFAGKSVLELGCGAALPSILTAVHGA 98
>U97194-6|AAB52451.2| 244|Caenorhabditis elegans Hypothetical
protein C37A2.6 protein.
Length = 244
Score = 31.9 bits (69), Expect = 0.42
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 146 YSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGILAAKCGALVTLTDSL 310
++FY WP L+ ++ + +G +++ G G G I A+ CGA L + +
Sbjct: 54 WAFY-WPGGQGLSRFILDNKPLFQGSEIVDFGAGCGSASISASICGAKKILANDI 107
>Z81581-9|CAN86610.1| 307|Caenorhabditis elegans Hypothetical
protein T02E1.5a protein.
Length = 307
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 194 WTQRRHIRGLRVLELGCGTGLPGILAAKCGAL 289
W R+ +RG VL G G+GL ++A + G L
Sbjct: 31 WLLRKDVRGQTVLITGSGSGLGRLMAFEFGKL 62
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -2
Query: 617 CTFESPLLPVELQ*TSLCCVPGKNTKNARQCLQADTLQLIVLLRIVM 477
C +P V+ S C+PG N+RQC+ A++ LR M
Sbjct: 46 CESPNPQCRVDCTRPSCTCLPGHVYSNSRQCIPANSCYQTQSLRCRM 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,507,724
Number of Sequences: 27780
Number of extensions: 298264
Number of successful extensions: 920
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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