Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31465
(364 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 31 0.25
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 31 0.25
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 0.25
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 27 4.0
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 27 4.0
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 27 4.0
AF003137-1|AAB93642.1| 294|Caenorhabditis elegans Hypothetical ... 27 4.0
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z72516-2|CAA96689.2| 513|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 26 7.0
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 26 7.0
AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin syntha... 26 7.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 26 7.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 26 7.0
AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin syntha... 26 7.0
U00067-1|AAK20074.1| 305|Caenorhabditis elegans Hypothetical pr... 26 9.3
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 31.1 bits (67), Expect = 0.25
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -3
Query: 305 GTTPSSAVLEPGPFSCRSPFTSQL*GFLGPGSVSTILCGRAALYGGRGDTQTSLTGGSGA 126
G+T S+ + PG S + T + PGS T+ G ++ YG + +S + G+ +
Sbjct: 146 GSTGSTVTVVPGSSSTFASSTP-IASSSSPGSTVTVAPGSSSTYGSSTPSASSSSSGTMS 204
Query: 125 TNS 117
TNS
Sbjct: 205 TNS 207
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 31.1 bits (67), Expect = 0.25
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -3
Query: 305 GTTPSSAVLEPGPFSCRSPFTSQL*GFLGPGSVSTILCGRAALYGGRGDTQTSLTGGSGA 126
G+T S+ + PG S + T + PGS T+ G ++ YG + +S + G+ +
Sbjct: 353 GSTGSTVTVVPGSSSTFASSTP-IASSSSPGSTVTVAPGSSSTYGSSTPSASSSSSGTMS 411
Query: 125 TNS 117
TNS
Sbjct: 412 TNS 414
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 31.1 bits (67), Expect = 0.25
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -3
Query: 305 GTTPSSAVLEPGPFSCRSPFTSQL*GFLGPGSVSTILCGRAALYGGRGDTQTSLTGGSGA 126
G+T S+ + PG S + T + PGS T+ G ++ YG + +S + G+ +
Sbjct: 353 GSTGSTVTVVPGSSSTFASSTP-IASSSSPGSTVTVAPGSSSTYGSSTPSASSSSSGTMS 411
Query: 125 TNS 117
TNS
Sbjct: 412 TNS 414
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical protein
ZK1067.1 protein.
Length = 1323
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 29 TRTVHSHLKWRNAHKQQGRSTSDRHRQAIRCW 124
T ++H+ LK N Q + D +++ +RCW
Sbjct: 1093 TDSIHNFLKDGNRLSQPPNCSQDLYQELLRCW 1124
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 29 TRTVHSHLKWRNAHKQQGRSTSDRHRQAIRCW 124
T ++H+ LK N Q + D +++ +RCW
Sbjct: 1093 TDSIHNFLKDGNRLSQPPNCSQDLYQELLRCW 1124
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 29 TRTVHSHLKWRNAHKQQGRSTSDRHRQAIRCW 124
T ++H+ LK N Q + D +++ +RCW
Sbjct: 1144 TDSIHNFLKDGNRLSQPPNCSQDLYQELLRCW 1175
>AF003137-1|AAB93642.1| 294|Caenorhabditis elegans Hypothetical
protein C27A12.4 protein.
Length = 294
Score = 27.1 bits (57), Expect = 4.0
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 208 TDPGPKNPHNCDVKGDLQLNGPGSKTAELGVVPSVKKSKS 327
TDP H+ GDL SKTAE+ V+P + + KS
Sbjct: 4 TDPSQLYNHHSVTNGDLCT----SKTAEMEVLPPIGRDKS 39
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +1
Query: 205 ETDPGPKNPHNCD-VKGDLQLNGPGSKTAELGVVPSVKKSKSDPEKGSNSEKAD 363
ET K P + VK + N KTA VP+ KK S E +K++
Sbjct: 41 ETKTLDKRPQTAELVKDEKNSNSEEKKTASANEVPAQKKLNSKEEVKKEKKKSE 94
>Z72516-2|CAA96689.2| 513|Caenorhabditis elegans Hypothetical
protein T25G3.3 protein.
Length = 513
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 307 KVRRQARRFWNLGRLVVD 254
+ RR A+R W L RLVVD
Sbjct: 410 RTRRTAKRQWKLKRLVVD 427
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 317 FLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLG 219
F+T TT S +++ +C SP TSQ LG
Sbjct: 2713 FMTVDTTTSGSIMS-ADITCASPVTSQTAALLG 2744
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 317 FLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLG 219
F+T TT S +++ +C SP TSQ LG
Sbjct: 2713 FMTVDTTTSGSIMS-ADITCASPVTSQTAALLG 2744
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 317 FLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLG 219
F+T TT S +++ +C SP TSQ LG
Sbjct: 2713 FMTVDTTTSGSIMS-ADITCASPVTSQTAALLG 2744
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 317 FLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLG 219
F+T TT S +++ +C SP TSQ LG
Sbjct: 2713 FMTVDTTTSGSIMS-ADITCASPVTSQTAALLG 2744
>AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin synthase
2 protein.
Length = 1668
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -2
Query: 231 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHW 139
R LG HP G VW+ + + HW
Sbjct: 887 RRLGAACGRIHPRGDGAMVWYQKFEYAIGHW 917
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 1 TTSVKFTSPHPHRS*PPEVAERSQTTRKKHIRSS 102
T +K T+ HPHR PP+ + ++ + +SS
Sbjct: 689 TRHLKRTTEHPHRKQPPQKRDNTKDQHRGGKKSS 722
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 1 TTSVKFTSPHPHRS*PPEVAERSQTTRKKHIRSS 102
T +K T+ HPHR PP+ + ++ + +SS
Sbjct: 911 TRHLKRTTEHPHRKQPPQKRDNTKDQHRGGKKSS 944
>AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin synthase
protein 2 protein.
Length = 1668
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -2
Query: 231 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHW 139
R LG HP G VW+ + + HW
Sbjct: 887 RRLGAACGRIHPRGDGAMVWYQKFEYAIGHW 917
>U00067-1|AAK20074.1| 305|Caenorhabditis elegans Hypothetical
protein F54E7.5 protein.
Length = 305
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 319 IS*LKVRRQARRFWNLGRLVVDPLLHHNCEDSWAPGQF 206
I+ KVR+Q FWN + PLL + D +P QF
Sbjct: 29 ITDFKVRQQCSDFWNQSQACPSPLLRVS-TDINSPTQF 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.311 0.127 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,031,990
Number of Sequences: 27780
Number of extensions: 190916
Number of successful extensions: 352
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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