Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31456
         (732 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   3.2  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   4.2  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   4.2  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          24   5.6  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 421  LGDCPSPASMMVASTMITD 477
            +G CP PA  +V+ T+I D
Sbjct: 1200 IGICPYPAECLVSQTLIFD 1218


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 438 TGEHDGREHNDNRRQEYRGVAETIRRA 518
           T  H   E  DN  Q Y    E++RR+
Sbjct: 410 TTTHKSPEREDNPSQPYEAYLESVRRS 436


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 618 IHVLLTGGDQQELFLHRIIILL*SFL 541
           IH  +   + Q+ FLHR+  +L SFL
Sbjct: 794 IHYAVIKKELQDKFLHRVSCILKSFL 819


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +3

Query: 66  LHVVLLTFVKC*YAIAANHLFSLRIKKLKFN 158
           LH +     +C Y   A  L SLRIKK   N
Sbjct: 324 LHAISKVMKECWYQHPAARLSSLRIKKTLAN 354


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,862
Number of Sequences: 2352
Number of extensions: 12163
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)