Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31456
         (732 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015262-1|AAT94491.1| 1280|Drosophila melanogaster LD40317p pro...    32   0.93 
AE014297-467|AAF54121.2| 1280|Drosophila melanogaster CG9727-PA ...    32   0.93 
AY061242-1|AAL28790.1|  387|Drosophila melanogaster LD18356p pro...    30   3.7  
AF294396-1|AAG02486.1|  387|Drosophila melanogaster IkappaB kina...    30   3.7  
AE013599-3957|AAF47273.2|  387|Drosophila melanogaster CG16910-P...    29   8.6  

>BT015262-1|AAT94491.1| 1280|Drosophila melanogaster LD40317p
           protein.
          Length = 1280

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = -3

Query: 682 TESPRPVPWSLRTSPVQHMGLHPCPPDRRRSAGTV-PSSNHYSALKFPSVSSSH-LRARR 509
           T S  P P +  TSPV   GL   PP +  S  +V PSS   +  K  S +    LRA+R
Sbjct: 641 TTSATPPPPNSETSPVPGPGLSMGPPSQMMSTSSVSPSSTVDTTPKVASRNQMMILRAKR 700

Query: 508 IVSA 497
           +++A
Sbjct: 701 LMAA 704


>AE014297-467|AAF54121.2| 1280|Drosophila melanogaster CG9727-PA
           protein.
          Length = 1280

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = -3

Query: 682 TESPRPVPWSLRTSPVQHMGLHPCPPDRRRSAGTV-PSSNHYSALKFPSVSSSH-LRARR 509
           T S  P P +  TSPV   GL   PP +  S  +V PSS   +  K  S +    LRA+R
Sbjct: 641 TTSATPPPPNSETSPVPGPGLSMGPPSQMMSTSSVSPSSTVDTTPKVASRNQMMILRAKR 700

Query: 508 IVSA 497
           +++A
Sbjct: 701 LMAA 704


>AY061242-1|AAL28790.1|  387|Drosophila melanogaster LD18356p
           protein.
          Length = 387

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
 Frame = +1

Query: 256 DDESFIILGTSPGSSL----DLK---CNGIHNGENSLDNTQIE-EAMKDLPAEANMAFKA 411
           D+ESF+ILG+SP SSL     L+   C      E ++ +T  +   +  +P     + + 
Sbjct: 3   DEESFVILGSSPCSSLMPDSSLRSDVCGNAQEAEETVASTSTQPPTVNCIPVSITASQQQ 62

Query: 412 HFKLGDCPSPASMMVASTM---ITDDKSTEELQKRFGELLDENLILKETLKQNNDSMKEQ 582
           H  L    S    +  S +   I  D     +  +F  L       +E +K  N  M  +
Sbjct: 63  HKSLDSGSSQQQSLATSFIMGEIQSDVLKNSVYSQFPSLCSLQGSAEEVVKLQN--MMTE 120

Query: 583 FLLIASCQEDMDE 621
           +L + S  + +++
Sbjct: 121 YLALKSTLDKVNQ 133


>AF294396-1|AAG02486.1|  387|Drosophila melanogaster IkappaB kinase
           gamma protein.
          Length = 387

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
 Frame = +1

Query: 256 DDESFIILGTSPGSSL----DLK---CNGIHNGENSLDNTQIE-EAMKDLPAEANMAFKA 411
           D+ESF+ILG+SP SSL     L+   C      E ++ +T  +   +  +P     + + 
Sbjct: 3   DEESFVILGSSPCSSLMPDSSLRSDVCGNAQEAEETVASTSTQPPTVNCIPVSITASQQQ 62

Query: 412 HFKLGDCPSPASMMVASTM---ITDDKSTEELQKRFGELLDENLILKETLKQNNDSMKEQ 582
           H  L    S    +  S +   I  D     +  +F  L       +E +K  N  M  +
Sbjct: 63  HKSLDSGSSQQQSLATSFIMGEIQSDVLKNSVYSQFPSLCSLQGSAEEVVKLQN--MMTE 120

Query: 583 FLLIASCQEDMDE 621
           +L + S  + +++
Sbjct: 121 YLALKSTLDKVNQ 133


>AE013599-3957|AAF47273.2|  387|Drosophila melanogaster CG16910-PA
           protein.
          Length = 387

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +1

Query: 256 DDESFIILGTSPGSSL 303
           D+ESF+ILG+SP SSL
Sbjct: 3   DEESFVILGSSPCSSL 18


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,622,739
Number of Sequences: 53049
Number of extensions: 592049
Number of successful extensions: 1800
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1800
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)