Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31455
         (515 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC131588-1|AAI31589.1|  484|Homo sapiens PPP1R3F protein protein.      29   9.7  
AK127847-1|BAC87159.1|  129|Homo sapiens protein ( Homo sapiens ...    29   9.7  

>BC131588-1|AAI31589.1|  484|Homo sapiens PPP1R3F protein protein.
          Length = 484

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +2

Query: 65  TAHVHPIPKKGDRSD----PSSYRPIAITSLLSKVMERIINIQLLKYLGGSPADQ 217
           T  V  +P  G+ ++    P S  P+A T +L     RI     L  LGGSP DQ
Sbjct: 64  TLQVSDVPMTGNPAEEGDVPRSSPPVAFTEVLQAPAIRIPPSSPLCGLGGSPRDQ 118


>AK127847-1|BAC87159.1|  129|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45950 fis, clone PLACE7008136. ).
          Length = 129

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +3

Query: 309 GEALAVSLDIAKAFDRVWHXALLSKLPSYGIPEGLCKWIASLF 437
           G  + +S+D  K FD++ H  ++  L   GI     K I +++
Sbjct: 32  GNHMIISIDARKGFDKIQHPFMMKTLSKIGIEGTYLKVIKAIY 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,229,991
Number of Sequences: 237096
Number of extensions: 1895006
Number of successful extensions: 4136
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4136
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)