Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31455
(515 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 57 2e-08
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 53 3e-07
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 53 3e-07
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 49 4e-06
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 48 6e-06
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 48 6e-06
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 48 6e-06
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 48 6e-06
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 48 6e-06
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 48 6e-06
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 48 1e-05
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 48 1e-05
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 48 1e-05
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 48 1e-05
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 47 1e-05
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 47 1e-05
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 47 2e-05
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 46 4e-05
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 45 7e-05
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 45 7e-05
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 43 2e-04
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 41 9e-04
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 38 0.006
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 36 0.025
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 35 0.057
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 32 0.53
AE014298-691|AAF45995.3| 840|Drosophila melanogaster CG4041-PA ... 31 1.2
BT021948-1|AAX51653.1| 772|Drosophila melanogaster LD13191p pro... 30 2.1
AE014296-3304|AAN11624.1| 981|Drosophila melanogaster CG17233-P... 30 2.1
AE014296-3303|AAF49048.3| 1465|Drosophila melanogaster CG17233-P... 30 2.1
AE014296-3302|AAN11623.1| 1173|Drosophila melanogaster CG17233-P... 30 2.1
AE014134-1595|AAF52737.2| 222|Drosophila melanogaster CG18661-P... 30 2.1
BT025826-1|ABF85726.1| 391|Drosophila melanogaster IP06836p pro... 29 3.7
AE014296-921|ABC66129.1| 158|Drosophila melanogaster CG34047-PA... 28 8.6
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/65 (40%), Positives = 40/65 (61%)
Frame = +3
Query: 192 IWEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXA 371
I +R+++ D Q+GFR G S + + LT +A + K AV +D+ +AFDRVWH
Sbjct: 538 IMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQAFDDKEYCNAVFIDMQQAFDRVWHDG 597
Query: 372 LLSKL 386
L+SK+
Sbjct: 598 LISKV 602
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDRSD-PSSYRPIAITSLLSKVMERII 172
P WK A + I K G + P SYRPI++ S LSK+ ER+I
Sbjct: 490 PKQWKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLI 531
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +2
Query: 38 ANRVPSSWKTAHVHPIPKKGDRSD-PSSYRPIAITSLLSKVMERIINIQLLKYL 196
A P WK A + PI K G D P SYRPI++ S LSK++E++I ++L+K+L
Sbjct: 510 AGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFL 563
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/65 (43%), Positives = 36/65 (55%)
Frame = +3
Query: 225 QYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSKLPSYGIP 404
QYGFR+G + + L + E+++SK V+LDI AFD VWH LL KL G P
Sbjct: 573 QYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTP 632
Query: 405 EGLCK 419
L K
Sbjct: 633 IYLIK 637
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +2
Query: 38 ANRVPSSWKTAHVHPIPKKGDRSD-PSSYRPIAITSLLSKVMERIINIQLLKYL 196
A P WK A + PI K G D P SYRPI++ S LSK++E++I ++L+K+L
Sbjct: 458 AGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFL 511
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/65 (43%), Positives = 36/65 (55%)
Frame = +3
Query: 225 QYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSKLPSYGIP 404
QYGFR+G + + L + E+++SK V+LDI AFD VWH LL KL G P
Sbjct: 521 QYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTP 580
Query: 405 EGLCK 419
L K
Sbjct: 581 IYLIK 585
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 48.8 bits (111), Expect = 4e-06
Identities = 26/61 (42%), Positives = 34/61 (55%)
Frame = +3
Query: 204 RQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSK 383
++ I Q+GFR + + +T EA E K AV LDI++AFDRVWH LL K
Sbjct: 586 KKAIPLHQFGFRKEHGSEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLK 645
Query: 384 L 386
L
Sbjct: 646 L 646
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKG-DRSDPSSYRPIAITSLLSKVMERIINIQLLK 190
P +WK A V I K G ++P SYRPI++ S LSK+ ER++ +L K
Sbjct: 534 PEAWKHAQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRLFK 581
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +3
Query: 204 RQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSK 383
++ I Q+GFR + +T EA E K AV LDI++AFDRVWH LL K
Sbjct: 470 KKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLK 529
Query: 384 L 386
L
Sbjct: 530 L 530
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLLK 190
P +WK A V I K G +DP SYRPI++ S LSK+ ER++ +L +
Sbjct: 418 PDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFR 465
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +3
Query: 204 RQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSK 383
++ I Q+GFR + +T EA E K AV LDI++AFDRVWH LL K
Sbjct: 598 KKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLK 657
Query: 384 L 386
L
Sbjct: 658 L 658
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDRS-DPSSYRPIAITSLLSKVMERIINIQLLK 190
P +WK A V I K G S +P SYRPI++ S LSK+ ER++ +L +
Sbjct: 546 PEAWKHAQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRLFR 593
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +3
Query: 204 RQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSK 383
++ I Q+GFR + +T EA E K AV LDI++AFDRVWH LL K
Sbjct: 586 KKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLK 645
Query: 384 L 386
L
Sbjct: 646 L 646
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLLK 190
P +WK A V I K G +DP SYRPI++ S LSK+ ER++ +L +
Sbjct: 534 PDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFR 581
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +3
Query: 204 RQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSK 383
++ I Q+GFR + +T EA E K AV LDI++AFDRVWH LL K
Sbjct: 586 KKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLK 645
Query: 384 L 386
L
Sbjct: 646 L 646
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLLK 190
P +WK A V I K G +DP SYRPI++ S LSK+ ER++ +L +
Sbjct: 534 PDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFR 581
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +3
Query: 204 RQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSK 383
++ I Q+GFR + +T EA E K AV LDI++AFDRVWH LL K
Sbjct: 548 KKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLK 607
Query: 384 L 386
L
Sbjct: 608 L 608
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLLK 190
P +WK A V I K G +DP SYRPI++ S LSK+ ER++ +L +
Sbjct: 496 PDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFR 543
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +3
Query: 204 RQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSK 383
++ I Q+GFR + +T EA E K AV LDI++AFDRVWH LL K
Sbjct: 586 KKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLK 645
Query: 384 L 386
L
Sbjct: 646 L 646
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLLK 190
P +WK A V I K G +DP SYRPI++ S LSK+ ER++ +L +
Sbjct: 534 PDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFR 581
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/58 (43%), Positives = 30/58 (51%)
Frame = +3
Query: 213 ISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSKL 386
I Q+GFR A L +T +A + K A LDI +AFDRVWH LL KL
Sbjct: 145 IPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKL 202
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDRSDP-SSYRPIAITSLLSKVMERII 172
P+ WK A + IPK G +SYRPI++ S LSK++ERI+
Sbjct: 90 PNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERIL 131
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/58 (43%), Positives = 30/58 (51%)
Frame = +3
Query: 213 ISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSKL 386
I Q+GFR A L +T +A + K A LDI +AFDRVWH LL KL
Sbjct: 592 IPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKL 649
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDRSDP-SSYRPIAITSLLSKVMERII 172
P+ WK A + IPK G +SYRPI++ S LSK++ERI+
Sbjct: 537 PNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERIL 578
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/58 (43%), Positives = 30/58 (51%)
Frame = +3
Query: 213 ISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSKL 386
I Q+GFR A L +T +A + K A LDI +AFDRVWH LL KL
Sbjct: 592 IPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKL 649
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDRSDP-SSYRPIAITSLLSKVMERII 172
P+ WK A + IPK G +SYRPI++ S LSK++ERI+
Sbjct: 537 PNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERIL 578
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/58 (43%), Positives = 30/58 (51%)
Frame = +3
Query: 213 ISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSKL 386
I Q+GFR A L +T +A + K A LDI +AFDRVWH LL KL
Sbjct: 592 IPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKL 649
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDRSDP-SSYRPIAITSLLSKVMERII 172
P+ WK A + IPK G +SYRPI++ S LSK++ERI+
Sbjct: 537 PNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERIL 578
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/50 (40%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKG-DRSDPSSYRPIAITSLLSKVMERIINIQLLKYL 196
P WK + + IPK G D++ PSSYRPI++ + LSK+ E+++ +++ +L
Sbjct: 485 PQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHL 534
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +3
Query: 225 QYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSKLPSYGIP 404
Q+GFR + + +T A E + A+ LD+A+AFDRVW LL K+ +P
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL-LP 602
Query: 405 EGLCKWIASLFW 440
+ K + S +
Sbjct: 603 QNTHKLLKSYLY 614
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/50 (40%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKG-DRSDPSSYRPIAITSLLSKVMERIINIQLLKYL 196
P WK + + IPK G D++ PSSYRPI++ + LSK+ E+++ +++ +L
Sbjct: 485 PQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHL 534
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +3
Query: 225 QYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSKLPSYGIP 404
Q+GFR + + +T A E + A+ LD+A+AFDRVW LL K+ +P
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL-LP 602
Query: 405 EGLCKWIASLFW 440
+ K + S +
Sbjct: 603 QNTHKLLKSYLY 614
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/72 (33%), Positives = 43/72 (59%)
Frame = +3
Query: 210 LISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSKLP 389
LI+D+Q+GF+ G+S D L+Y+ + +SK V+LD ++AFDRV +++ +L
Sbjct: 538 LINDKQFGFKKGKSTSDCLLYVDYL---ITKSKMHTSLVTLDFSRAFDRVGVHSIIQQLQ 594
Query: 390 SYGIPEGLCKWI 425
+ + K+I
Sbjct: 595 EWKTGPKIIKYI 606
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/56 (32%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +2
Query: 8 LTRLYRISYCANRVPSSWKTAHVHPIPKKG-DRSDPSSYRPIAITSLLSKVMERII 172
+T+L+ + ++ +P ++KT+ + PI K D++ SSYRPI++ ++K++++II
Sbjct: 471 ITKLFNEIFNSH-IPQAYKTSLIIPILKPNTDKTKTSSYRPISLNCCIAKILDKII 525
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +3
Query: 189 SIWEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHX 368
SI E + + + Q+GFR G + L + + A +SK ++ LDI +AFDRVWH
Sbjct: 536 SIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTAYDSKEYCNSLFLDIREAFDRVWHI 595
Query: 369 ALLSKL 386
L K+
Sbjct: 596 GLQLKI 601
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGD-RSDPSSYRPIAITSLLSKVMERIINIQLLKYL 196
P WK + I K G +P+SYRPI++ +SKV ER+I ++++ +
Sbjct: 489 PYQWKLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVRIVSIM 538
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 225 QYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSK 383
Q+GFR + L + + EA+E+K A+ LDI +AFDRVWH LL K
Sbjct: 550 QFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDRVWHPGLLYK 602
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLL 187
P +WK+A + I K G +D SYRP ++ L K+MER+I +LL
Sbjct: 491 PKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLILNRLL 537
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 225 QYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSK 383
Q+GFR + L + + EA+E+K A+ LDI +AFDRVWH LL K
Sbjct: 352 QFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDRVWHPGLLYK 404
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLL 187
P +WK+A + I K G +D SYRPI++ L K+MER+I +LL
Sbjct: 293 PKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLILNRLL 339
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +3
Query: 210 LISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSKLP 389
LIS Q F+ S D L+ + H + AL +K ++ D +AFDRV A+L +L
Sbjct: 543 LISHNQVAFKSNHSTMDALLRIQHFASNALSTKNHVSILATDFERAFDRVGIHAVLCRLE 602
Query: 390 SYGI 401
+GI
Sbjct: 603 RWGI 606
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +2
Query: 44 RVPSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLLKYL 196
+ P +W++A + PI K SD +SYRPI++ S L K +E+II +L ++
Sbjct: 487 KYPHTWRSAIIIPISKPNKPPSDINSYRPISLLSCLGKTLEKIIAQRLTWFI 538
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 41.1 bits (92), Expect = 9e-04
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +3
Query: 210 LISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSKLP 389
+I Q+GFR + + +T A E + AV LD+++AFD+VW L+ K+
Sbjct: 541 IIPAHQFGFRESHGTIEQVNRITTEIRTAFEYREYCTAVFLDVSQAFDKVWLDGLMFKI- 599
Query: 390 SYGIPEGLCKWIASLFW 440
+PE K + S +
Sbjct: 600 KISLPESTHKLLKSYLY 616
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 8 LTRLYRISYCANRVPSSWKTAHVHPIPKKG-DRSDPSSYRPIAITSLLSKVMERIINIQL 184
+T+L+ P WK + IPK G + + SSYRPI++ S +SK+ E+ + I+L
Sbjct: 473 ITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIRL 532
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +3
Query: 327 SLDIAKAFDRVWHXALLSKLPSYGIPEGLCKWIASLFWMGGAS 455
+LD++KAFD + H ++ L +YG P+G ++ + + GG S
Sbjct: 480 NLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTS 522
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 26 ISYCANRVPSSWKTAHVHPIPKKGDRSDPSSYRPIAITSLLSKVMERIINIQLLKYLGGS 205
I +C N +P S + A IPK P +RPI++ S+L + + I+ +L +
Sbjct: 385 ILWCGN-LPHSIRLARTVFIPKTVTAKRPQDFRPISVPSVLVRQLNAILATRLNSSINWD 443
Query: 206 P 208
P
Sbjct: 444 P 444
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 36.3 bits (80), Expect = 0.025
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPK-KGDRSDPSSYRPIAITSLLSKVMERIINIQLLKYL 196
P WK + + IPK + D++ PS YRPI++ + LSK+ E+ + +++ +L
Sbjct: 27 PQKWKKSIIIMIPKPEKDKTQPS-YRPISLLTCLSKLFEKGLLLRISPHL 75
Score = 34.3 bits (75), Expect = 0.099
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +3
Query: 225 QYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHXALLSKLPSYGIP 404
Q+ F A + + +T A E + A+ LD+A+AFDRVW L+ K+ +P
Sbjct: 85 QFDFPAKHGAIEQVNRITTEIRTAFEHREYCTALFLDVAQAFDRVWLDGLMFKIIQL-LP 143
Query: 405 EGLCKWIAS 431
+ + K + S
Sbjct: 144 QNIHKLLKS 152
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 35.1 bits (77), Expect = 0.057
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Frame = +3
Query: 213 ISDRQYGFRHGRSAGDLLVYLTHRWAEALE-------SKGEALAVSLDIAKAFDRVWHXA 371
+ +QYGFR G+S D L +T +AL+ SK ++LD+ AF+
Sbjct: 510 LQGQQYGFRKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNTARWPI 569
Query: 372 LLSKLPSYGIPEGLCKWIASLF 437
+L + + G+P+ + I + F
Sbjct: 570 ILGAMRNLGVPDYIRGVIGNYF 591
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 50 PSSWKTAHVHPIPK-KGDRSDPSSYRPIAITSLLSKVMERII 172
P WK + + K KG + P SYRP+ + ++ K+ ERI+
Sbjct: 455 PKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERIL 496
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDRS--DPSSYRPIAITSLLSKVMERII 172
P+ WK V + K D+ +PSSYR I + + KV+E I+
Sbjct: 487 PAEWKCPRVVSLLKGPDKDKCEPSSYRGICLLPVFGKVLEAIM 529
>AE014298-691|AAF45995.3| 840|Drosophila melanogaster CG4041-PA
protein.
Length = 840
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -2
Query: 172 NYSLHHLGKQGSYRDRPIA--RWVRPVTLLG 86
NY LHH+ K G+Y PI R++ P LLG
Sbjct: 138 NYGLHHMTKGGAYVPFPIGNIRYMAPERLLG 168
>BT021948-1|AAX51653.1| 772|Drosophila melanogaster LD13191p
protein.
Length = 772
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +2
Query: 110 PSSYRPIAITSLLSKVMERIINIQLLKYLGGSPADQ*PTVRFPSRSLSWRSSCIPYSQVG 289
P + +P+++ +L+ + + ++ LK+L G D P V PSR L++ + PY + G
Sbjct: 528 PVAPKPVSVGTLIGEKKTQFMD-SYLKFLQGERDDDPPPVVKPSRKLNYPRA--PYKRKG 584
Query: 290 *SLGEQGRGSCCEP 331
+G GS EP
Sbjct: 585 -----KGSGSGDEP 593
>AE014296-3304|AAN11624.1| 981|Drosophila melanogaster CG17233-PB,
isoform B protein.
Length = 981
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +2
Query: 110 PSSYRPIAITSLLSKVMERIINIQLLKYLGGSPADQ*PTVRFPSRSLSWRSSCIPYSQVG 289
P + +P+++ +L+ + + ++ LK+L G D P V PSR L++ + PY + G
Sbjct: 336 PVAPKPVSVGTLIGEKKTQFMD-SYLKFLQGERDDDPPPVVKPSRKLNYPRA--PYKRKG 392
Query: 290 *SLGEQGRGSCCEP 331
+G GS EP
Sbjct: 393 -----KGSGSGDEP 401
>AE014296-3303|AAF49048.3| 1465|Drosophila melanogaster CG17233-PC,
isoform C protein.
Length = 1465
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +2
Query: 110 PSSYRPIAITSLLSKVMERIINIQLLKYLGGSPADQ*PTVRFPSRSLSWRSSCIPYSQVG 289
P + +P+++ +L+ + + ++ LK+L G D P V PSR L++ + PY + G
Sbjct: 820 PVAPKPVSVGTLIGEKKTQFMD-SYLKFLQGERDDDPPPVVKPSRKLNYPRA--PYKRKG 876
Query: 290 *SLGEQGRGSCCEP 331
+G GS EP
Sbjct: 877 -----KGSGSGDEP 885
>AE014296-3302|AAN11623.1| 1173|Drosophila melanogaster CG17233-PA,
isoform A protein.
Length = 1173
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +2
Query: 110 PSSYRPIAITSLLSKVMERIINIQLLKYLGGSPADQ*PTVRFPSRSLSWRSSCIPYSQVG 289
P + +P+++ +L+ + + ++ LK+L G D P V PSR L++ + PY + G
Sbjct: 528 PVAPKPVSVGTLIGEKKTQFMD-SYLKFLQGERDDDPPPVVKPSRKLNYPRA--PYKRKG 584
Query: 290 *SLGEQGRGSCCEP 331
+G GS EP
Sbjct: 585 -----KGSGSGDEP 593
>AE014134-1595|AAF52737.2| 222|Drosophila melanogaster CG18661-PA
protein.
Length = 222
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +2
Query: 71 HVHPIPKKGDRSDPSSYR---PIAITSLLSKVMERIINIQLLKYLGGS 205
H+HP RS PS+ R PI+ +LLS+V + N+QLL+ GS
Sbjct: 9 HIHPRCSFSKRSHPSADRNSQPIS-EALLSQVDKTTENLQLLEIASGS 55
>BT025826-1|ABF85726.1| 391|Drosophila melanogaster IP06836p
protein.
Length = 391
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -3
Query: 426 RSTCRDP-RGFRKMVASTEVPYARPCRRLSRYQGSQQEPRPCSPRLQPTC 280
R TCR P V +T +R CR+ G ++ C PR +P C
Sbjct: 310 RMTCRMPWTRTATRVPTTVTSGSRRCRKCRTAAGQRESAALCRPRPRPRC 359
>AE014296-921|ABC66129.1| 158|Drosophila melanogaster CG34047-PA
protein.
Length = 158
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 381 KLPSYGIPEGLCKWIASLFWMG 446
+L +GIP LC+WI +F G
Sbjct: 116 ELGQWGIPSSLCRWIHGMFPRG 137
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,920,655
Number of Sequences: 53049
Number of extensions: 545520
Number of successful extensions: 1433
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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