Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31453
         (308 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M94314-1|AAC28251.1|  157|Homo sapiens ribosomal protein L30 pro...    53   1e-07
CR456729-1|CAG33010.1|  157|Homo sapiens RPL24 protein.                53   1e-07
BC070193-1|AAH70193.1|  157|Homo sapiens ribosomal protein L24 p...    53   1e-07
BC000690-1|AAH00690.1|  157|Homo sapiens ribosomal protein L24 p...    53   1e-07
AB061828-1|BAB79466.1|  157|Homo sapiens ribosomal protein L24 p...    53   1e-07
AL158815-1|CAI19461.1|  128|Homo sapiens se, the PEX6 gene for p...    51   8e-07

>M94314-1|AAC28251.1|  157|Homo sapiens ribosomal protein L30
           protein.
          Length = 157

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = -1

Query: 308 RTRRTQKFQRAIVGASLSDIMAKRNMKPEV 219
           RTRR  KFQRAI GASL+DIMAKRN KPEV
Sbjct: 71  RTRRAVKFQRAITGASLADIMAKRNQKPEV 100


>CR456729-1|CAG33010.1|  157|Homo sapiens RPL24 protein.
          Length = 157

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = -1

Query: 308 RTRRTQKFQRAIVGASLSDIMAKRNMKPEV 219
           RTRR  KFQRAI GASL+DIMAKRN KPEV
Sbjct: 71  RTRRAVKFQRAITGASLADIMAKRNQKPEV 100


>BC070193-1|AAH70193.1|  157|Homo sapiens ribosomal protein L24
           protein.
          Length = 157

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = -1

Query: 308 RTRRTQKFQRAIVGASLSDIMAKRNMKPEV 219
           RTRR  KFQRAI GASL+DIMAKRN KPEV
Sbjct: 71  RTRRAVKFQRAITGASLADIMAKRNQKPEV 100


>BC000690-1|AAH00690.1|  157|Homo sapiens ribosomal protein L24
           protein.
          Length = 157

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = -1

Query: 308 RTRRTQKFQRAIVGASLSDIMAKRNMKPEV 219
           RTRR  KFQRAI GASL+DIMAKRN KPEV
Sbjct: 71  RTRRAVKFQRAITGASLADIMAKRNQKPEV 100


>AB061828-1|BAB79466.1|  157|Homo sapiens ribosomal protein L24
           protein.
          Length = 157

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = -1

Query: 308 RTRRTQKFQRAIVGASLSDIMAKRNMKPEV 219
           RTRR  KFQRAI GASL+DIMAKRN KPEV
Sbjct: 71  RTRRAVKFQRAITGASLADIMAKRNQKPEV 100


>AL158815-1|CAI19461.1|  128|Homo sapiens se, the PEX6 gene for
           peroxisomal biogenesis factorA, member 8) protein.
          Length = 128

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 24/30 (80%), Positives = 25/30 (83%)
 Frame = -1

Query: 308 RTRRTQKFQRAIVGASLSDIMAKRNMKPEV 219
           RTRR  KFQRAI GASL+DI AKRN KPEV
Sbjct: 71  RTRRAVKFQRAITGASLADITAKRNQKPEV 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,792,556
Number of Sequences: 237096
Number of extensions: 196043
Number of successful extensions: 277
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)