Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31451
         (536 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3380|AAF51613.1|  416|Drosophila melanogaster CG6020-PA...   188   3e-48
BT004491-1|AAO42655.1|  327|Drosophila melanogaster GM13757p pro...   108   4e-24
BT029034-1|ABJ16967.1|  324|Drosophila melanogaster IP02858p pro...    71   1e-12

>AE014296-3380|AAF51613.1|  416|Drosophila melanogaster CG6020-PA
           protein.
          Length = 416

 Score =  188 bits (459), Expect = 3e-48
 Identities = 93/121 (76%), Positives = 100/121 (82%)
 Frame = +2

Query: 173 NLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKV 352
           N AA KRGTGGRSSFNGIVATVFG TGFVGRYVCNKLGK GTQ+ILPYRGD  D  RLKV
Sbjct: 47  NPAAMKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKV 106

Query: 353 CGDLCQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARIC 532
            GDL QVLF  Y+L D  SI  AV++SNVVINLVGRD+ETKNFK+ DVHV+G  RIARI 
Sbjct: 107 TGDLGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIA 166

Query: 533 R 535
           R
Sbjct: 167 R 167


>BT004491-1|AAO42655.1|  327|Drosophila melanogaster GM13757p
           protein.
          Length = 327

 Score =  108 bits (260), Expect = 4e-24
 Identities = 54/78 (69%), Positives = 61/78 (78%)
 Frame = +2

Query: 302 LILPYRGDFYDAQRLKVCGDLCQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNF 481
           +ILPYRGD  D  RLKV GDL QVLF  Y+L D  SI  AV++SNVVINLVGRD+ETKNF
Sbjct: 1   MILPYRGDDSDVIRLKVTGDLGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNF 60

Query: 482 KYNDVHVDGVRRIARICR 535
           K+ DVHV+G  RIARI R
Sbjct: 61  KFKDVHVNGAERIARIAR 78


>BT029034-1|ABJ16967.1|  324|Drosophila melanogaster IP02858p
           protein.
          Length = 324

 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +2

Query: 407 SIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICR 535
           SI  AV++SNVVINLVGRD+ETKNFK+ DVHV+G  RIARI R
Sbjct: 33  SIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAR 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,923,858
Number of Sequences: 53049
Number of extensions: 467700
Number of successful extensions: 1181
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)