Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31441
         (380 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011521-1|AAS15657.1|  292|Drosophila melanogaster RH44796p pro...   169   1e-42
AE014296-2109|AAF49947.2|  282|Drosophila melanogaster CG6910-PA...   169   1e-42
AE013599-1039|AAM68774.1|  384|Drosophila melanogaster CG33478-P...    28   4.7  

>BT011521-1|AAS15657.1|  292|Drosophila melanogaster RH44796p
           protein.
          Length = 292

 Score =  169 bits (411), Expect = 1e-42
 Identities = 68/97 (70%), Positives = 79/97 (81%)
 Frame = +1

Query: 88  DWFHLTGLIHDLGKVMAFYDEPQWCVVGDTFPVGCKWADSIVYGPESFKDNPDTYNPKYN 267
           DW HLT LIHDLGK+MAFY EPQW VVGDTF VGC+W DSIVY  ESF+ NPD  NP YN
Sbjct: 121 DWLHLTALIHDLGKIMAFYGEPQWAVVGDTFAVGCRWGDSIVYRDESFEGNPDGDNPAYN 180

Query: 268 TKYGMYKPHCGIDNLLMSWSHDEYLYQFLLHNKSTIP 378
           T+ G+Y+P+CG+DNLLMSW HDEY+Y  L HNK+ +P
Sbjct: 181 TELGIYQPNCGVDNLLMSWGHDEYMYSVLKHNKTKLP 217



 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +3

Query: 3   ESDPDTDLPNIVHAFQTAERIREDHPD 83
           ESDPD DLPNI+HAFQ AER R + P+
Sbjct: 93  ESDPDLDLPNIIHAFQAAERARAEFPE 119


>AE014296-2109|AAF49947.2|  282|Drosophila melanogaster CG6910-PA
           protein.
          Length = 282

 Score =  169 bits (411), Expect = 1e-42
 Identities = 68/97 (70%), Positives = 79/97 (81%)
 Frame = +1

Query: 88  DWFHLTGLIHDLGKVMAFYDEPQWCVVGDTFPVGCKWADSIVYGPESFKDNPDTYNPKYN 267
           DW HLT LIHDLGK+MAFY EPQW VVGDTF VGC+W DSIVY  ESF+ NPD  NP YN
Sbjct: 111 DWLHLTALIHDLGKIMAFYGEPQWAVVGDTFAVGCRWGDSIVYRDESFEGNPDGDNPAYN 170

Query: 268 TKYGMYKPHCGIDNLLMSWSHDEYLYQFLLHNKSTIP 378
           T+ G+Y+P+CG+DNLLMSW HDEY+Y  L HNK+ +P
Sbjct: 171 TELGIYQPNCGVDNLLMSWGHDEYMYSVLKHNKTKLP 207



 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +3

Query: 3   ESDPDTDLPNIVHAFQTAERIREDHPD 83
           ESDPD DLPNI+HAFQ AER R + P+
Sbjct: 83  ESDPDLDLPNIIHAFQAAERARAEFPE 109


>AE013599-1039|AAM68774.1|  384|Drosophila melanogaster CG33478-PB,
           isoform B protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = -3

Query: 375 YRRLVM*QELIQILIVAPGHQQIIDSAVGLVHSIF 271
           Y R+V  ++L+++ I  PG  Q++ S + LV +++
Sbjct: 238 YNRIVRFKDLVELFIKGPGSVQLMCSVLVLVSNLY 272


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,588,793
Number of Sequences: 53049
Number of extensions: 378736
Number of successful extensions: 823
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)