Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31441
(380 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038609-3|AAU87825.1| 193|Caenorhabditis elegans Hypothetical ... 130 2e-31
AF043697-4|AAO38636.1| 431|Caenorhabditis elegans Hypothetical ... 30 0.49
AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical ... 30 0.49
Z70755-7|CAA94787.1| 281|Caenorhabditis elegans Hypothetical pr... 30 0.64
Z70751-2|CAA94753.1| 281|Caenorhabditis elegans Hypothetical pr... 30 0.64
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 27 3.4
U55854-4|AAK68160.1| 280|Caenorhabditis elegans Hypothetical pr... 27 3.4
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 27 3.4
Z81015-3|CAB02656.1| 266|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z77133-2|CAB00864.2| 664|Caenorhabditis elegans Hypothetical pr... 27 6.0
>AF038609-3|AAU87825.1| 193|Caenorhabditis elegans Hypothetical
protein C54E4.5 protein.
Length = 193
Score = 130 bits (315), Expect = 2e-31
Identities = 53/88 (60%), Positives = 66/88 (75%)
Frame = +1
Query: 85 RDWFHLTGLIHDLGKVMAFYDEPQWCVVGDTFPVGCKWADSIVYGPESFKDNPDTYNPKY 264
+ W HL GLIHDLGK+M+ + E QW V GDT+PVGC A SIVYG SF NPD +P Y
Sbjct: 104 KPWMHLAGLIHDLGKIMSVWGEEQWAVTGDTYPVGCAPAASIVYGKSSFDGNPDISHPVY 163
Query: 265 NTKYGMYKPHCGIDNLLMSWSHDEYLYQ 348
T+ GMY+ CG++NLLM+WSHDEY+Y+
Sbjct: 164 GTQMGMYQEKCGMENLLMTWSHDEYMYK 191
Score = 50.0 bits (114), Expect = 6e-07
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = +3
Query: 3 ESDPDTDLPNIVHAFQTAERIREDHPDE 86
ESDPD D N++HA+QTAE+IRE+HPD+
Sbjct: 77 ESDPDVDEANLIHAYQTAEKIRENHPDK 104
>AF043697-4|AAO38636.1| 431|Caenorhabditis elegans Hypothetical
protein F56C11.6b protein.
Length = 431
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 262 YNTKYGMYKPHCGIDNLLMSWSHDEYLYQFLLHNKS 369
Y+ YG Y+ + N++ HD Y YQF HN +
Sbjct: 286 YSINYGTYR----LANIMTDLQHDVYFYQFDYHNSA 317
>AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical
protein F56C11.6a protein.
Length = 548
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 262 YNTKYGMYKPHCGIDNLLMSWSHDEYLYQFLLHNKS 369
Y+ YG Y+ + N++ HD Y YQF HN +
Sbjct: 403 YSINYGTYR----LANIMTDLQHDVYFYQFDYHNSA 434
>Z70755-7|CAA94787.1| 281|Caenorhabditis elegans Hypothetical
protein K06A4.5 protein.
Length = 281
Score = 29.9 bits (64), Expect = 0.64
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 49 RPLKGSERITLMRDWFHLTGLIHDL 123
R L GS ITL WF+LT ++ DL
Sbjct: 119 RFLVGSSNITLFERWFYLTDVVKDL 143
>Z70751-2|CAA94753.1| 281|Caenorhabditis elegans Hypothetical
protein K06A4.5 protein.
Length = 281
Score = 29.9 bits (64), Expect = 0.64
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 49 RPLKGSERITLMRDWFHLTGLIHDL 123
R L GS ITL WF+LT ++ DL
Sbjct: 119 RFLVGSSNITLFERWFYLTDVVKDL 143
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 27 PNIVHAFQTAERIREDHPDEGLVPPY 104
PN+ FQ R P G+VPPY
Sbjct: 1020 PNVPQPFQPLNRFDVTAPGAGIVPPY 1045
>U55854-4|AAK68160.1| 280|Caenorhabditis elegans Hypothetical
protein C04G6.2 protein.
Length = 280
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 1 TSQTPTRTYQTSCTLSRPLKGSERITLMRDWFHLTGLIHDLGKVMAFYDEP-QWCVVGDT 177
T+ T + T T+ T + + +TL + + I++ G + P WCV+GD
Sbjct: 56 TTTTTSSTTTTTTTTTTTEATTTTLTLAPNPCTMCAPIYNTGCMGVGMPSPTDWCVIGDD 115
Query: 178 FPV 186
PV
Sbjct: 116 IPV 118
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 27 PNIVHAFQTAERIREDHPDEGLVPPY 104
PN+ FQ R P G+VPPY
Sbjct: 1020 PNVPQPFQPLNRFDVTAPGAGIVPPY 1045
>Z81015-3|CAB02656.1| 266|Caenorhabditis elegans Hypothetical
protein C11E4.4 protein.
Length = 266
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 52 PLKGSERITLMRDWFHLTGLIHDLGKVMAF 141
PL G+ IT + HLT L+HD+ ++F
Sbjct: 199 PLFGNSNITEIEYTTHLTMLLHDMVPALSF 228
>Z77133-2|CAB00864.2| 664|Caenorhabditis elegans Hypothetical
protein K03A11.4 protein.
Length = 664
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 48 QTAERIREDHPDEGLVPPYWPHS*F 122
++ E+I + DE ++PP WPH F
Sbjct: 255 KSLEKIDKTLLDEKVIPPDWPHKYF 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,294,858
Number of Sequences: 27780
Number of extensions: 185813
Number of successful extensions: 402
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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