Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31439
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79600-3|CAB01876.1| 260|Caenorhabditis elegans Hypothetical pr... 147 5e-36
AC084158-26|AAM15621.2| 216|Caenorhabditis elegans Hypothetical... 31 0.84
AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical... 31 0.84
Z68114-5|CAA92155.1| 316|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 28 5.9
AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical ... 28 5.9
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical... 27 7.9
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical... 27 7.9
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ... 27 7.9
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical... 27 7.9
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical... 27 7.9
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z79600-3|CAB01876.1| 260|Caenorhabditis elegans Hypothetical
protein F59C6.5 protein.
Length = 260
Score = 147 bits (357), Expect = 5e-36
Identities = 66/148 (44%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Frame = +2
Query: 86 NVFRAFCNALYNTVDAPVTWFRETVVEP--NQKKYPWYHQNYRRVPTIDQCYDDDVVCDF 259
+++ F + DAP TWFRET+V+P N+ + P+YH+ RVP ID+C +D C +
Sbjct: 31 SIYPRFRYYAHKAFDAPATWFRETIVQPLNNKNRLPYYHRQLTRVPEIDECGVNDKACFY 90
Query: 260 EANAQFKRDRAVDSEILSILXQRYEDCMMYEQPDHATKCRSLWDKYKSAEEAWFIKYGDL 439
EAN Q++ D+ VD IL L QR + CM+Y PDH + C + + + E +F+KYG+L
Sbjct: 91 EANEQYRLDKMVDGFILQTLRQRVDRCMLYNNPDH-SPCAKVIEDMEENELNFFMKYGEL 149
Query: 440 GAYGDARKAYMKQKHRMVWERRNGPLSD 523
G D R AYMKQKHRM+WERR+ + D
Sbjct: 150 GGESDVRDAYMKQKHRMIWERRHPEIMD 177
>AC084158-26|AAM15621.2| 216|Caenorhabditis elegans Hypothetical
protein Y69A2AR.32b protein.
Length = 216
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 440 GAYGDARKAYMKQKHRMVWERRNGPLSDLTK*SFKSVINSR 562
GAYGD Y + + +W++ GP D T F ++SR
Sbjct: 75 GAYGDVGSVYGIAQQKRIWQKPRGP--DATSEEFAHSVSSR 113
>AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical
protein Y69A2AR.32a protein.
Length = 384
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 440 GAYGDARKAYMKQKHRMVWERRNGPLSDLTK*SFKSVINSR 562
GAYGD Y + + +W++ GP D T F ++SR
Sbjct: 243 GAYGDVGSVYGIAQQKRIWQKPRGP--DATSEEFAHSVSSR 281
>Z68114-5|CAA92155.1| 316|Caenorhabditis elegans Hypothetical
protein F17A2.7 protein.
Length = 316
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 7/56 (12%)
Frame = -2
Query: 202 VLMIPRVLLLVWFDNSFSEPCYRS------IDCIVESIAKCSKHII-IRRISRLVP 56
+L+IP ++LL++ +S C+++ + CI + +A + +I IR++S L P
Sbjct: 15 ILVIPSLILLIFIILRYSPDCFQTFKYILLVTCISQIVAVTTNCLIQIRQVSNLTP 70
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 224 DQCYDDDVVCDFEANAQFKRDRAVDSEILSILXQRYE 334
D+ YDD+ E NA+F + DS+ I+ R E
Sbjct: 119 DEAYDDEEDFTVETNAEFNENSLDDSDEYPIVPNRQE 155
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 224 DQCYDDDVVCDFEANAQFKRDRAVDSEILSILXQRYE 334
D+ YDD+ E NA+F + DS+ I+ R E
Sbjct: 119 DEAYDDEEDFTVETNAEFNENSLDDSDEYPIVPNRQE 155
>AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical
protein Y39G10AR.11 protein.
Length = 788
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +2
Query: 278 KRDRAVDSEILSILXQRYEDCMMYEQPDHAT-----KCRSLWDKYKSAEEAWFIKYGDLG 442
+++ ++ ++ ++L Q +C +Y+ + + R D YK E F K+GDL
Sbjct: 541 EQNEGLEEKVENVLAQYRSECELYQNSVSSLQMDRDRLRKDVDLYKGKAEILFTKFGDLV 600
Query: 443 AYGD--ARKAYMK 475
D +KA+ K
Sbjct: 601 KTNDELEKKAHQK 613
>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 260 EANAQFKRDRAVDSEILSILXQRYEDCMMYEQ----PDHATKCRSLWDKY 397
+A A +R R+ S S + DC + E+ D + KCR W+KY
Sbjct: 417 KAKADSERGRSSTSSSSSSFDKLIWDCPLIEKYPFGADASDKCREKWNKY 466
>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 260 EANAQFKRDRAVDSEILSILXQRYEDCMMYEQ----PDHATKCRSLWDKY 397
+A A +R R+ S S + DC + E+ D + KCR W+KY
Sbjct: 417 KAKADSERGRSSTSSSSSSFDKLIWDCPLIEKYPFGADASDKCREKWNKY 466
>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 260 EANAQFKRDRAVDSEILSILXQRYEDCMMYEQ----PDHATKCRSLWDKY 397
+A A +R R+ S S + DC + E+ D + KCR W+KY
Sbjct: 417 KAKADSERGRSSTSSSSSSFDKLIWDCPLIEKYPFGADASDKCREKWNKY 466
>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 260 EANAQFKRDRAVDSEILSILXQRYEDCMMYEQ----PDHATKCRSLWDKY 397
+A A +R R+ S S + DC + E+ D + KCR W+KY
Sbjct: 417 KAKADSERGRSSTSSSSSSFDKLIWDCPLIEKYPFGADASDKCREKWNKY 466
>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 260 EANAQFKRDRAVDSEILSILXQRYEDCMMYEQ----PDHATKCRSLWDKY 397
+A A +R R+ S S + DC + E+ D + KCR W+KY
Sbjct: 417 KAKADSERGRSSTSSSSSSFDKLIWDCPLIEKYPFGADASDKCREKWNKY 466
>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 260 EANAQFKRDRAVDSEILSILXQRYEDCMMYEQ----PDHATKCRSLWDKY 397
+A A +R R+ S S + DC + E+ D + KCR W+KY
Sbjct: 417 KAKADSERGRSSTSSSSSSFDKLIWDCPLIEKYPFGADASDKCREKWNKY 466
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,673,967
Number of Sequences: 27780
Number of extensions: 253769
Number of successful extensions: 631
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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