Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31433
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical... 161 3e-40
AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical... 161 3e-40
U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical pr... 152 2e-37
AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical ... 36 0.036
AL022288-8|CAA18367.2| 402|Caenorhabditis elegans Hypothetical ... 35 0.063
AL031629-1|CAA20974.1| 287|Caenorhabditis elegans Hypothetical ... 32 0.44
U51999-3|AAA96084.1| 306|Caenorhabditis elegans Hypothetical pr... 29 3.1
U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical p... 28 5.5
U41552-7|AAU05560.1| 1174|Caenorhabditis elegans Hypothetical pr... 28 7.2
U41552-6|AAU05561.1| 1203|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF067216-14|AAC17517.4| 729|Caenorhabditis elegans Hypothetical... 27 9.6
>AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical
protein Y110A7A.6a protein.
Length = 450
Score = 161 bits (392), Expect = 3e-40
Identities = 81/158 (51%), Positives = 107/158 (67%), Gaps = 6/158 (3%)
Frame = +3
Query: 153 MTKPFPIRGERSNYVNIPHVIAMVGLPARGKTYISKKLSRYLNWIGINTRVFNLGEYRRH 332
MT P + V +P+VIA+VGLPARGKTYIS KL RYLNWIGI T+ FN+GEYRR
Sbjct: 12 MTYFVPKSDNSNEQVRVPNVIALVGLPARGKTYISHKLCRYLNWIGIKTKAFNVGEYRRR 71
Query: 333 ATSAYT--SHEFFRADNKEAMAIRQQCALXALQDVCEWL-TKGGEVAVFDATNSTLDRRR 503
A + +EFF +N IR +CA A++D+ +L K GEVA+ DATN+T DRR+
Sbjct: 72 ACNLEEEGENEFFSPNNARGQKIRDECAKLAIEDMGRYLDNKEGEVAILDATNTTRDRRK 131
Query: 504 MIRDL---VVHKMGFKLFFVESICDDPXIIEQNIMEVK 608
++ + ++H+ F++FFVES+CDDP II NI EVK
Sbjct: 132 LLMEFCRNMMHEPPFRVFFVESVCDDPDIINSNITEVK 169
>AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical
protein Y110A7A.6b protein.
Length = 435
Score = 161 bits (392), Expect = 3e-40
Identities = 81/158 (51%), Positives = 107/158 (67%), Gaps = 6/158 (3%)
Frame = +3
Query: 153 MTKPFPIRGERSNYVNIPHVIAMVGLPARGKTYISKKLSRYLNWIGINTRVFNLGEYRRH 332
MT P + V +P+VIA+VGLPARGKTYIS KL RYLNWIGI T+ FN+GEYRR
Sbjct: 18 MTYFVPKSDNSNEQVRVPNVIALVGLPARGKTYISHKLCRYLNWIGIKTKAFNVGEYRRR 77
Query: 333 ATSAYT--SHEFFRADNKEAMAIRQQCALXALQDVCEWL-TKGGEVAVFDATNSTLDRRR 503
A + +EFF +N IR +CA A++D+ +L K GEVA+ DATN+T DRR+
Sbjct: 78 ACNLEEEGENEFFSPNNARGQKIRDECAKLAIEDMGRYLDNKEGEVAILDATNTTRDRRK 137
Query: 504 MIRDL---VVHKMGFKLFFVESICDDPXIIEQNIMEVK 608
++ + ++H+ F++FFVES+CDDP II NI EVK
Sbjct: 138 LLMEFCRNMMHEPPFRVFFVESVCDDPDIINSNITEVK 175
>U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical
protein K02B2.1 protein.
Length = 457
Score = 152 bits (369), Expect = 2e-37
Identities = 77/147 (52%), Positives = 102/147 (69%), Gaps = 6/147 (4%)
Frame = +3
Query: 186 SNYVNIPHVIAMVGLPARGKTYISKKLSRYLNWIGINTRVFNLGEYRR-HATSAYTSH-- 356
S+ V +P+VI MVGLPARGKTYISKKL RYL W G T+VFN+GEYRR A +A H
Sbjct: 23 SDQVRVPNVIVMVGLPARGKTYISKKLCRYLKWTGFTTKVFNVGEYRRSDANAADAIHGA 82
Query: 357 --EFFRADNKEAMAIRQQCALXALQDVCEWLTKG-GEVAVFDATNSTLDRRRMIRDLVVH 527
FF +N +A+ +R + A A++D+ ++L G G VA+FDATN+T DRRR+I D
Sbjct: 83 NASFFSPNNADALKVRAESARRAMEDMADYLNSGTGGVAIFDATNTTKDRRRIIIDF-CK 141
Query: 528 KMGFKLFFVESICDDPXIIEQNIMEVK 608
K + FF+ES+CDDP II+ N+ +VK
Sbjct: 142 KQRLRCFFIESVCDDPAIIDCNVTDVK 168
>AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical
protein ZK1025.4b protein.
Length = 452
Score = 35.5 bits (78), Expect = 0.036
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = -2
Query: 605 YFHN---VLFNNXRVITYRFNKEKLEAHLVDYKVSYHPPSVQSRICSIEDGDFSAFG 444
+ HN LF+N V+ +RFN ++++A++V+ + P S + I ++ D FG
Sbjct: 340 FLHNSTTTLFSNGTVLHFRFNIKEIKANVVEKPYRFFPNSTEGHIWNMHDTMHKIFG 396
>AL022288-8|CAA18367.2| 402|Caenorhabditis elegans Hypothetical
protein ZK1025.4a protein.
Length = 402
Score = 34.7 bits (76), Expect = 0.063
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = -2
Query: 605 YFHN---VLFNNXRVITYRFNKEKLEAHLVDYKVSYHPPSVQSRICSIEDGDFSAFGQPF 435
+ HN LF+N V+ +RFN ++++A++V+ + P S + I ++ D + + F
Sbjct: 340 FLHNSTTTLFSNGTVLHFRFNIKEIKANVVEKPYRFFPNSTEGHIWNMHDTVRTVWNFLF 399
Query: 434 THI 426
H+
Sbjct: 400 FHV 402
>AL031629-1|CAA20974.1| 287|Caenorhabditis elegans Hypothetical
protein Y106G6D.1 protein.
Length = 287
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 30 SLRLRGGINNNSDSKKHELNQCTSAMSPETQRLLPPTSETI 152
SLR G+ +N D++K L + + M E++ LL P ETI
Sbjct: 45 SLRKTMGVQSNDDAEKLSLIKKINEMEKESENLLTPGDETI 85
>U51999-3|AAA96084.1| 306|Caenorhabditis elegans Hypothetical
protein C43H6.7 protein.
Length = 306
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 658 LEHYPCSECLCSPDCSLFTSIMFCSIIXG 572
LEH P + +C D TS++FC ++ G
Sbjct: 188 LEHAPLQDIICDYDGFARTSVVFCYLLSG 216
>U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical
protein C06A5.1 protein.
Length = 1932
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -3
Query: 325 LYSPRLNTLVLIPIQ--FR*RDSFLEMYVFPRAGRPTI 218
L+ P++ T LI I F+ DS+L+M +FPR P +
Sbjct: 658 LFHPKITTNPLIRITEPFKLIDSYLKMTIFPRKEAPRL 695
>U41552-7|AAU05560.1| 1174|Caenorhabditis elegans Hypothetical protein
K07E3.7a protein.
Length = 1174
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 458 FSAFGQPFTHIL*CX*GALLSYSHGFFVVGPEEL 357
FS FGQ F +I+ G LL ++V PEEL
Sbjct: 979 FSVFGQMFFNIITQTTGYLLVRGQSWYVPNPEEL 1012
>U41552-6|AAU05561.1| 1203|Caenorhabditis elegans Hypothetical protein
K07E3.7b protein.
Length = 1203
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 458 FSAFGQPFTHIL*CX*GALLSYSHGFFVVGPEEL 357
FS FGQ F +I+ G LL ++V PEEL
Sbjct: 1008 FSVFGQMFFNIITQTTGYLLVRGQSWYVPNPEEL 1041
>AF067216-14|AAC17517.4| 729|Caenorhabditis elegans Hypothetical
protein C35E7.1 protein.
Length = 729
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 602 FHNVLFNNXRVITYRFNKEKLEA-HLVDYKVSYHPPSVQSRICSIE 468
FHNV+ N Y ++ LE V VSY P V RIC ++
Sbjct: 71 FHNVVTNWIEYYIYDIKEKCLEQIEPVVPPVSYDPTPVGDRICIVD 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,571,482
Number of Sequences: 27780
Number of extensions: 357251
Number of successful extensions: 1031
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -