Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31433
(690 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.17
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.17
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 25 0.90
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 23 2.1
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 23 2.1
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 2.7
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 3.6
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 3.6
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 3.6
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 22 6.3
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 6.3
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 6.3
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.1 bits (57), Expect = 0.17
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = -3
Query: 535 PILWTTRSLIIRRRSKVEFVASKTATSPPLVSHSHTSCNAXKAHCCLIAMASLLSALKNS 356
P+ L + + +E V S SPP SHS K+ C+ +A L++S
Sbjct: 445 PLHTECEDLSVSGEAGIEEVKSPVLRSPPAFSHSRCPPEIHKSCICVRFIAEHTKMLEDS 504
Query: 355 WLVYAD 338
V D
Sbjct: 505 TKVKED 510
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.1 bits (57), Expect = 0.17
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = -3
Query: 535 PILWTTRSLIIRRRSKVEFVASKTATSPPLVSHSHTSCNAXKAHCCLIAMASLLSALKNS 356
P+ L + + +E V S SPP SHS K+ C+ +A L++S
Sbjct: 445 PLHTECEDLSVSGEAGIEEVKSPVLRSPPAFSHSRCPPEIHKSCICVRFIAEHTKMLEDS 504
Query: 355 WLVYAD 338
V D
Sbjct: 505 TKVKED 510
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 24.6 bits (51), Expect = 0.90
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 646 PCSECLCSPDCSLFTS 599
P +CSPD S+FTS
Sbjct: 30 PVKSLVCSPDLSVFTS 45
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 451 AEKSPSSMLQILLWTDGG 504
A+++PS L ++ W GG
Sbjct: 114 ADRTPSQSLPVIFWIHGG 131
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 451 AEKSPSSMLQILLWTDGG 504
A+++PS L ++ W GG
Sbjct: 114 ADRTPSQSLPVIFWIHGG 131
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 243 KTYISKKLSRYLNWIGINTRVFN 311
KT IS + + L W+G + FN
Sbjct: 299 KTCISGRAFQVLTWLGYSNSAFN 321
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 149 YYDETVPDPRRTIELCQHTTCYRNGGSPG 235
YY+ ++PD +R ++L + GG G
Sbjct: 642 YYNRSIPDHKRIVKLRGSIIDHSYGGGFG 670
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 149 YYDETVPDPRRTIELCQHTTCYRNGGSPG 235
YY+ ++PD +R ++L + GG G
Sbjct: 680 YYNRSIPDHKRIVKLRGSIIDHSYGGGFG 708
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/34 (26%), Positives = 15/34 (44%)
Frame = -3
Query: 538 KPILWTTRSLIIRRRSKVEFVASKTATSPPLVSH 437
+P W+ R R+++ AT P L S+
Sbjct: 329 RPAFWSLRKAFARKKTDYSSFGKILATEPTLFSN 362
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 159 KPFPIRGERSNYVNIPHVIAMVG 227
K + G + + +NI VIA VG
Sbjct: 228 KAMVVSGSKGSNINISQVIACVG 250
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 24 SPSLRLRGGINNNSDSKKH 80
+P+L + GG+ +N+ SKK+
Sbjct: 30 NPTLFMIGGVFSNNKSKKY 48
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 6.3
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -2
Query: 548 EKLEAHLVDYK 516
+KLE HL++YK
Sbjct: 430 QKLEKHLIEYK 440
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,201
Number of Sequences: 438
Number of extensions: 4337
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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