Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31432
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X17558-1|CAA35591.1| 1299|Drosophila melanogaster patched protei...    31   1.6  
M28999-1|AAA28696.1| 1286|Drosophila melanogaster patched protein.     31   1.6  
AE013599-680|AAF59062.1| 1286|Drosophila melanogaster CG2411-PA ...    31   1.6  
U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein.     29   3.8  
AY119280-1|AAM51140.1| 1015|Drosophila melanogaster SD27140p pro...    29   3.8  

>X17558-1|CAA35591.1| 1299|Drosophila melanogaster patched protein
           protein.
          Length = 1299

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -2

Query: 381 GWTRESLLKI----GKNIHREIEPLLSEHKSSKTKHDFYMASTVIL 256
           GWT+E   ++     +N  RE+E LL +     T +D Y+ S+  L
Sbjct: 372 GWTQEKAAEVLNAWQRNFSREVEQLLRKQSRIATNYDIYVFSSAAL 417


>M28999-1|AAA28696.1| 1286|Drosophila melanogaster patched protein.
          Length = 1286

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -2

Query: 381 GWTRESLLKI----GKNIHREIEPLLSEHKSSKTKHDFYMASTVIL 256
           GWT+E   ++     +N  RE+E LL +     T +D Y+ S+  L
Sbjct: 372 GWTQEKAAEVLNAWQRNFSREVEQLLRKQSRIATNYDIYVFSSAAL 417


>AE013599-680|AAF59062.1| 1286|Drosophila melanogaster CG2411-PA
           protein.
          Length = 1286

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -2

Query: 381 GWTRESLLKI----GKNIHREIEPLLSEHKSSKTKHDFYMASTVIL 256
           GWT+E   ++     +N  RE+E LL +     T +D Y+ S+  L
Sbjct: 372 GWTQEKAAEVLNAWQRNFSREVEQLLRKQSRIATNYDIYVFSSAAL 417


>U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein.
          Length = 1607

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 20/70 (28%), Positives = 39/70 (55%)
 Frame = -2

Query: 417  DNMNGCLLCQVNGWTRESLLKIGKNIHREIEPLLSEHKSSKTKHDFYMASTVILARKPRI 238
            ++++  L+ + + WTR  L+++    HR I  L S H++S      ++ S  +L  + R+
Sbjct: 1112 ESIHELLIHKFSTWTR--LIRVSSYCHRFIHTLRSHHRNSAP----FLTSEELLDAQRRL 1165

Query: 237  TIRHLQV*SY 208
             IRH+Q  S+
Sbjct: 1166 -IRHVQQKSF 1174


>AY119280-1|AAM51140.1| 1015|Drosophila melanogaster SD27140p
           protein.
          Length = 1015

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 20/70 (28%), Positives = 39/70 (55%)
 Frame = -2

Query: 417 DNMNGCLLCQVNGWTRESLLKIGKNIHREIEPLLSEHKSSKTKHDFYMASTVILARKPRI 238
           ++++  L+ + + WTR  L+++    HR I  L S H++S      ++ S  +L  + R+
Sbjct: 520 ESIHELLIHKFSTWTR--LIRVSSYCHRFIHTLRSHHRNSAP----FLTSEELLDAQRRL 573

Query: 237 TIRHLQV*SY 208
            IRH+Q  S+
Sbjct: 574 -IRHVQQKSF 582


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,454,319
Number of Sequences: 53049
Number of extensions: 565084
Number of successful extensions: 1242
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)