Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31430
(618 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 29 2.0
AF067222-3|AAC17019.1| 292|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical pr... 28 6.1
U20861-10|AAA62292.1| 213|Caenorhabditis elegans Hypothetical p... 28 6.1
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = -1
Query: 546 FRSCRWPSKVFSFINAVIITCSQNEVKLVEFDFQMRNLRYKITTRCCVGVLECSSMTSIY 367
++ C +P + +N CSQ V +FD + L +T C + S S Y
Sbjct: 573 YKKCNFPLLNRARVNWDFEFCSQKSVS-EKFDRLLSILNNLLTLHCPTKSISVSKSPSPY 631
Query: 366 HICFRKLRK 340
H RKL++
Sbjct: 632 HNIHRKLKR 640
>AF067222-3|AAC17019.1| 292|Caenorhabditis elegans Hypothetical
protein H11E01.1 protein.
Length = 292
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 12 QSCNVIFLFVKSKLLTN*ILFQTSYLKT-HRFLKHYMLSPNSYLETLDGV 158
Q+C+V L + S N L++ + K + FLKH+M N LE L+ +
Sbjct: 190 QTCSVSNLLIVSTNSENVTLWEPNTAKDLNLFLKHWMQGSNGRLERLEAI 239
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.9 bits (59), Expect = 6.1
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Frame = +1
Query: 247 AVAPLTAALSQPNPVSQLPMCSIPPVSATAGFPQLPEANVINTS-HRAALQ--HANATSC 417
++ + +A S LPM S P+S PQLP+ N S H + + C
Sbjct: 65 SIGTMPSAKIGDGSTSSLPMSSAKPMSTQTSEPQLPDVPEPNESLHNKTIDEFQKDQEKC 124
Query: 418 GYFVSQIPHLEIKFYQFYLVLRTSDNDCINEAENLG 525
++ LE++ Q L+ + C+ E + G
Sbjct: 125 DRLKARKAELEMRLRQKMQELK---DVCVEEGDITG 157
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.9 bits (59), Expect = 6.1
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Frame = +1
Query: 247 AVAPLTAALSQPNPVSQLPMCSIPPVSATAGFPQLPEANVINTS-HRAALQ--HANATSC 417
++ + +A S LPM S P+S PQLP+ N S H + + C
Sbjct: 65 SIGTMPSAKIGDGSTSSLPMSSAKPMSTQTSEPQLPDVPEPNESLHNKTIDEFQKDQEKC 124
Query: 418 GYFVSQIPHLEIKFYQFYLVLRTSDNDCINEAENLG 525
++ LE++ Q L+ + C+ E + G
Sbjct: 125 DRLKARKAELEMRLRQKMQELK---DVCVEEGDITG 157
>Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical
protein D2085.4 protein.
Length = 1001
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -1
Query: 459 EFDFQMRNLRYKITTRCCVGVLECSSMTSIYHICFRKLRKTSCCRN 322
EF+ ++R + + RCC+ L+ ++ +I+ FR L C +
Sbjct: 105 EFEKRIRETQRLLLARCCIKFLKNATENTIFFHIFRYLEDYVTCHS 150
>U20861-10|AAA62292.1| 213|Caenorhabditis elegans Hypothetical
protein C28H8.4 protein.
Length = 213
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 395 STPTQHLVVILYLRFLIWKSNSTSFTSF*EQVIMTALMKLKTLE 526
S HL+ I+ L IWKS S S S Q++ + + L+
Sbjct: 7 SADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLD 50
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 292 SQLPMCSIPPVSATAGFPQLPEANVINTS-HRAALQ--HANATSCGYFVSQIPHLEIKFY 462
S LPM S P+S PQLP+ N S H + + C ++ LE++
Sbjct: 12 SSLPMSSAKPMSTQTSEPQLPDVPEPNESLHNKTIDEFQKDQEKCDRLKARKAELEMRLR 71
Query: 463 QFYLVLRTSDNDCINEAENLG 525
Q L+ + C+ E + G
Sbjct: 72 QKMQELK---DVCVEEGDITG 89
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 292 SQLPMCSIPPVSATAGFPQLPEANVINTS-HRAALQ--HANATSCGYFVSQIPHLEIKFY 462
S LPM S P+S PQLP+ N S H + + C ++ LE++
Sbjct: 12 SSLPMSSAKPMSTQTSEPQLPDVPEPNESLHNKTIDEFQKDQEKCDRLKARKAELEMRLR 71
Query: 463 QFYLVLRTSDNDCINEAENLG 525
Q L+ + C+ E + G
Sbjct: 72 QKMQELK---DVCVEEGDITG 89
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,781,069
Number of Sequences: 27780
Number of extensions: 284710
Number of successful extensions: 850
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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