Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31430
         (618 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   2.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   2.4  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   4.2  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   4.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.6  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 228 LFLQLQIL*YLPICQLSLSIRLRKRHLMFLNNYL-EKACNV 109
           +F+ LQ L    I      ++++++H +F+NN L   AC++
Sbjct: 250 VFIGLQSLSLTNIQLEHFEMKIKRKHNVFVNNILAASACSL 290


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 372 IYHIC-FRKLRKTSCCRNWWDGTHRKLTDRIWLTQGC 265
           IY++  FR L K +   NWWD      +++I  ++GC
Sbjct: 387 IYNMVRFRNLVKGTKIDNWWDNG----SNQIAFSRGC 419


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 345 RKTSCCRNW 319
           RK +CCR+W
Sbjct: 396 RKKNCCRSW 404


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 345 RKTSCCRNW 319
           RK +CCR+W
Sbjct: 396 RKKNCCRSW 404


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 255 SVNSSPESAKSCQSTSYV 308
           S N+SP  A+ C ST+ +
Sbjct: 740 SPNASPSPAEQCASTTTI 757


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 358 LQEVEENQLLPKLVGW 311
           L++  +N LLP  VG+
Sbjct: 393 LEDAPQNSLLPNFVGY 408


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,129
Number of Sequences: 438
Number of extensions: 3090
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)