Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31427
(398 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0953 + 22860954-22861262 31 0.34
03_05_0319 - 23064997-23065443 31 0.34
03_05_0317 - 23056409-23056855 31 0.34
06_03_0355 + 19822110-19824491 30 0.59
04_03_0856 + 20336390-20336906,20337276-20337397 29 1.4
02_05_0223 - 26943210-26944623,26944741-26945666 29 1.4
04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194... 28 2.4
02_05_0787 - 31742685-31742702,31742703-31742744,31742993-317430... 28 2.4
07_03_0958 + 22881718-22881999,22882114-22883880 28 3.1
01_03_0051 - 11985456-11985803 28 3.1
11_06_0574 + 25098231-25099970 27 4.1
11_06_0570 + 25055864-25057603 27 4.1
01_05_0583 + 23420160-23420480 27 4.1
12_01_0339 + 2603351-2603891,2604048-2604226 27 5.5
10_08_0650 - 19591898-19593148 27 5.5
06_03_1201 + 28359286-28359452,28360018-28360075,28361060-283611... 27 5.5
05_04_0393 - 20895485-20895645,20895750-20896358,20896541-208966... 27 5.5
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 27 5.5
12_02_0107 - 13669781-13671982 27 7.2
11_06_0692 + 26327487-26328509 27 7.2
09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006 27 7.2
04_03_0758 + 19322891-19323193,19323606-19323778,19324778-19326095 27 7.2
12_01_0910 + 8858443-8859414 26 9.5
11_02_0016 - 7380933-7382027 26 9.5
04_04_1230 + 31929261-31929386,31929497-31929643,31929974-319300... 26 9.5
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 26 9.5
01_03_0164 + 13349295-13349489,13349509-13349939,13350181-13350589 26 9.5
>07_03_0953 + 22860954-22861262
Length = 102
Score = 31.1 bits (67), Expect = 0.34
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 232 RWVRLSPGRTRWRR*PDSGR*KRTAS-WSTSGRSTTGCGR 348
RW+R++ GR RW + SG R +S WS SG T GR
Sbjct: 8 RWMRMA-GRQRWLKRRRSGACSRASSAWSRSGGCDTQNGR 46
>03_05_0319 - 23064997-23065443
Length = 148
Score = 31.1 bits (67), Expect = 0.34
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 232 RWVRLSPGRTRWRR*PDSGR*KRTAS-WSTSGRSTTGCGRRT 354
RW+R++ GR RW + SG RT S WS S R T G R+
Sbjct: 8 RWMRMA-GRRRWLKRRRSGACSRTLSAWSRSRRCTAREGFRS 48
>03_05_0317 - 23056409-23056855
Length = 148
Score = 31.1 bits (67), Expect = 0.34
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 232 RWVRLSPGRTRWRR*PDSGR*KRTAS-WSTSGRSTTGCGRRT 354
RW+R++ GR RW + SG RT S WS S R T G R+
Sbjct: 8 RWMRMA-GRRRWLKRRRSGACSRTLSAWSRSRRCTAREGFRS 48
>06_03_0355 + 19822110-19824491
Length = 793
Score = 30.3 bits (65), Expect = 0.59
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +3
Query: 111 FHRALCQLAGEHAAGDPNKKLVDCDI--YQSVAAGNALANMLKMGSSKPWPDAMEALTGQ 284
+ RAL Q A+ D +K CD Y VA G L +K K + + L
Sbjct: 554 YRRALKQ---NRASFDEYRKKFPCDKPRYCDVAGGGGLVLSVKELEKKRLEEVQQKLAIA 610
Query: 285 REMKADGLLEYFRPLHDWLRA 347
EM + E+F L DW R+
Sbjct: 611 NEMIENFQHEWFSKLDDWARS 631
>04_03_0856 + 20336390-20336906,20337276-20337397
Length = 212
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 232 RWVRLSPGRTRWRR*PDSGR*KRTASWS-TSGRSTTGCGRRTSGPASTSAGN 384
RW RL+ R RWRR G + + + R TG G +G + +G+
Sbjct: 95 RWRRLTGRRRRWRRQQQDGGGAGSGDGAGPAARGVTGSGNLLAGSGAPQSGS 146
>02_05_0223 - 26943210-26944623,26944741-26945666
Length = 779
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -1
Query: 347 RPQPVVERPEVLQEAVRFHLPLSGQRLHRVRPGLRRTHLQHVCE 216
RP VV++ + +EAV + R+ R+ P LRR ++H+CE
Sbjct: 523 RPLTVVQQEMLRREAVT----IIAHRMGRMDPPLRRECVEHLCE 562
>04_03_1002 -
21617339-21617362,21618476-21618565,21618755-21619432,
21619536-21619772,21619849-21619896,21619995-21620045,
21620301-21620426,21620557-21620697,21621165-21621401,
21622467-21622571,21622812-21622982,21623306-21623380,
21623754-21623936,21624151-21624297,21624365-21624472,
21624605-21624709,21625109-21625213,21625322-21625381,
21625512-21625579,21625876-21625954,21626208-21626267,
21626445-21626498,21626834-21626886,21627405-21627494,
21628265-21628362,21628464-21628852
Length = 1193
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 307 SWSTSGRSTTGCGRRTSGPASTSAGNRPT 393
S +S S G GR T+ P+S+SAG RPT
Sbjct: 47 STPSSSSSAAGGGRPTT-PSSSSAGGRPT 74
>02_05_0787 -
31742685-31742702,31742703-31742744,31742993-31743022,
31743337-31744183,31744431-31744560,31744682-31744814
Length = 399
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +3
Query: 156 DPNKKLVDCDIYQSVAAGNALANMLKMGSSKPWPDAMEALTGQREMKADGLLEYFRPLH 332
DP D + ++ ALAN+ ++ PW D A G ++ +A ++ + LH
Sbjct: 122 DPTTHRPRTDFFAALPQLIALANLRQLVGQLPWDDPAAAAAGLQQAEAAQAAKFGQYLH 180
>07_03_0958 + 22881718-22881999,22882114-22883880
Length = 682
Score = 27.9 bits (59), Expect = 3.1
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 69 EYARYYVSFIIQFQFHRALCQLAGE-HAAGDPNKKLVDCDIYQSVAAGNALANMLKMGSS 245
EYA VS I + + HR L QL G H GD L+ +Y+ V G+ A++ G++
Sbjct: 369 EYASE-VSIISRLR-HRNLVQLVGWCHGRGD---FLL---VYELVPNGSLDAHLYGGGAT 420
Query: 246 KPWPDAMEALTG 281
PWP E G
Sbjct: 421 LPWPTRYEIALG 432
>01_03_0051 - 11985456-11985803
Length = 115
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 232 RWVRLSPGRTRWRR*PDSGR*KRTAS-WSTSGRSTTGCGR 348
RW+R++ GR RW + +G R +S WS SG GR
Sbjct: 8 RWMRMA-GRRRWLKRRRTGACSRASSAWSRSGGCDAQNGR 46
>11_06_0574 + 25098231-25099970
Length = 579
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 304 ASWSTSGRSTTGCGRRTSGPASTSAGNRP 390
A+W T G GR GP + +AG RP
Sbjct: 525 AAWMTPGDVNAMIGRLFGGPRNAAAGARP 553
>11_06_0570 + 25055864-25057603
Length = 579
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 304 ASWSTSGRSTTGCGRRTSGPASTSAGNRP 390
A+W T G GR GP + +AG RP
Sbjct: 525 AAWMTPGDVNAMIGRLFGGPRNAAAGARP 553
>01_05_0583 + 23420160-23420480
Length = 106
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 232 RWVRLSPGRTRWRR*PDSGR*KRTA-SWSTSGRSTTGCGR 348
RW R++ GR RW + SG R + +WS SG GR
Sbjct: 8 RWTRMA-GRRRWLKRRRSGACSRASLAWSRSGGCDAQNGR 46
>12_01_0339 + 2603351-2603891,2604048-2604226
Length = 239
Score = 27.1 bits (57), Expect = 5.5
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = +3
Query: 108 QFHRALCQLAGEHAAGDPNKKLVDCDIYQSVAAGNALANMLKMGSSKPWPDAMEALTGQR 287
Q A C + A G P V C +A A ++ +G ++ W DA + +R
Sbjct: 156 QIEFAACWACEKRAKGKP--VYVHCAFGHGRSACVVCAVLVALGIAENWKDAENIIREKR 213
Query: 288 EMKADGLLEYFRPLHDW 338
++K + + + + L DW
Sbjct: 214 KIKMNAV--HRKTLDDW 228
>10_08_0650 - 19591898-19593148
Length = 416
Score = 27.1 bits (57), Expect = 5.5
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -2
Query: 328 SGRKYSRRPSAFISRCPVSASIASGQGLDEPIFSMFASAFPAATLW*MSQSTSFLLGSPA 149
+G ++ RR F SR A G G+ P+ + L+ +S +F L +
Sbjct: 301 AGGRHRRRRLRFTSRVYKLEFAADGSGV--PVGFTKVESIGEYALFVSRRSHAFALPASG 358
Query: 148 ACSPASWHSARWNWN 104
A SPAS A W+
Sbjct: 359 AASPASSRIASTTWS 373
>06_03_1201 +
28359286-28359452,28360018-28360075,28361060-28361152,
28362100-28362421,28362698-28362982,28363431-28363459
Length = 317
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 335 LAAGGEPADRRAHRLGTD 388
LA GG P RRAH+LG +
Sbjct: 266 LAPGGLPRSRRAHQLGAE 283
>05_04_0393 -
20895485-20895645,20895750-20896358,20896541-20896616,
20896729-20896920,20897118-20897438,20897880-20898119,
20898205-20898522,20898621-20898678,20898778-20898936,
20900090-20900308,20900400-20900614
Length = 855
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 132 LAGEHAAGDPNKKLVDCDIYQSVAAGNA--LANMLKMG 239
L GE AAG+ + + C++ A GN+ L ++LK+G
Sbjct: 523 LLGEDAAGEYDHGNIPCNLLTVAATGNSSFLEDLLKVG 560
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 301 TASWSTSGRSTTGCGRRTSGPASTSAGNR 387
++S S+S S+T C S P +TSAG R
Sbjct: 39 SSSSSSSSPSSTSCSAAWSLPVATSAGRR 67
>12_02_0107 - 13669781-13671982
Length = 733
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 186 IYQSVAAGNALANMLKMGSSKPWPDAMEALTGQREMKA 299
I+ S+AAGN+ + + + PW + A T R+M+A
Sbjct: 302 IFVSLAAGNSGPSSSTLSNEAPWVLTVGASTIDRQMEA 339
>11_06_0692 + 26327487-26328509
Length = 340
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +1
Query: 214 RSQTC*RWVR-LSPGRTRWRR---*PDSGR*KRTASWSTSGRSTTGCGRRTSGPASTSAG 381
RS++ R R +SP RTRWR P++ + + RS++ +S +++S G
Sbjct: 152 RSRSVRRKARSMSPFRTRWRAPSPAPETAEEVEAVATPAASRSSSSSSTASSASSTSSRG 211
Query: 382 NR 387
+R
Sbjct: 212 SR 213
>09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006
Length = 585
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 319 SGRSTTGCGRRTSGPASTSAGNRP 390
SG T CG RTSGP + P
Sbjct: 212 SGGDATVCGSRTSGPGGGGSSGAP 235
>04_03_0758 + 19322891-19323193,19323606-19323778,19324778-19326095
Length = 597
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 365 AGPLVLRPQPVVERPEVLQEAVRFHLPLSGQR 270
A +V++PQP ++PE+ +A R P + QR
Sbjct: 528 ARQIVVQPQPPPQQPELAGQAFRAPAPQTPQR 559
>12_01_0910 + 8858443-8859414
Length = 323
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +1
Query: 7 PSIELRTTSTPQPS 48
PS+ LR+T+TPQP+
Sbjct: 81 PSVSLRSTTTPQPA 94
>11_02_0016 - 7380933-7382027
Length = 364
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 301 TASWSTSGRSTTGCGRRTSGPASTSAGNRPT 393
T+S S++ RST+ G RTS P + +A T
Sbjct: 318 TSSRSSTSRSTSCSGLRTSSPPAAAAAAAST 348
>04_04_1230 +
31929261-31929386,31929497-31929643,31929974-31930065,
31930159-31930255,31930533-31930576,31930708-31930796,
31931083-31931174,31931266-31931412,31931539-31931644,
31931736-31931812,31932281-31932352,31932738-31932865,
31932947-31933142,31933206-31933407,31933642-31933691
Length = 554
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 123 LCQLAGEHAAGDPNKKLVDCDIYQSV 200
LC GEH AG N+K V ++++++
Sbjct: 370 LCWAIGEHGAGGKNRKDVARELFENL 395
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 295 KRTASWSTSGRSTTGCGRRTSGPASTSAGNRPT 393
KR S+SGR+ + T+GP+ +SA + P+
Sbjct: 478 KRKKPGSSSGRANSSGTANTAGPSPSSAPSTPS 510
>01_03_0164 + 13349295-13349489,13349509-13349939,13350181-13350589
Length = 344
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 216 LANMLKMGSSKPWPDAMEALTGQREMKADGLLEYFRPLHDWLRAENQRTGEHIG 377
LA + + G+ KPW DA++ + + K L +Y + RA + G +G
Sbjct: 89 LAKVREEGAFKPWDDALDGIAEEETRK---LHKYLSDKIEAARARMEAMGLQLG 139
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,954,406
Number of Sequences: 37544
Number of extensions: 194228
Number of successful extensions: 901
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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