Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31427
         (398 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin...    58   3e-09
Z35663-4|CAA84724.1|  307|Caenorhabditis elegans Hypothetical pr...    29   1.2  
U41994-9|AAK31523.1|  786|Caenorhabditis elegans Hypothetical pr...    29   1.6  
U41746-9|AAA83334.3|  559|Caenorhabditis elegans Groundhog (hedg...    27   5.0  
Z81568-3|CAB04592.1|  643|Caenorhabditis elegans Hypothetical pr...    26   8.7  
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p...    26   8.7  
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr...    26   8.7  

>U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin
           converting enzyme)-like non-peptidase protein 1, isoform
           a protein.
          Length = 906

 Score = 57.6 bits (133), Expect = 3e-09
 Identities = 32/102 (31%), Positives = 52/102 (50%)
 Frame = +3

Query: 78  RYYVSFIIQFQFHRALCQLAGEHAAGDPNKKLVDCDIYQSVAAGNALANMLKMGSSKPWP 257
           R  +S++++FQ  +ALC          P   ++      S      L   +K+GSS  W 
Sbjct: 674 RTLISYVLKFQILKALC----------PEGTILSEGCILSEDTTEKLRETMKLGSSITWL 723

Query: 258 DAMEALTGQREMKADGLLEYFRPLHDWLRAENQRTGEHIGWE 383
            A+E ++G+ E+ A  LLEY+ PL +WLR  N+     +GW+
Sbjct: 724 KALEMISGKGELDAQPLLEYYEPLINWLRNTNEIDQVVVGWD 765


>Z35663-4|CAA84724.1|  307|Caenorhabditis elegans Hypothetical
           protein T04A8.6 protein.
          Length = 307

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +3

Query: 306 LLEYFRPLHDWLR---AENQRTGEHIGW 380
           LL YFR   + LR   A N+RTG H GW
Sbjct: 48  LLGYFRQFGNVLRIRVARNRRTGNHKGW 75


>U41994-9|AAK31523.1|  786|Caenorhabditis elegans Hypothetical
           protein F59A6.3 protein.
          Length = 786

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +1

Query: 298 RTASWSTSGRSTTGCGRRTSGPASTSAGNRPT 393
           R+   +TSG STT     TSGP++TS   + T
Sbjct: 568 RSTVSTTSGPSTTSGPSTTSGPSTTSGSTKST 599


>U41746-9|AAA83334.3|  559|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 6 protein.
          Length = 559

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -1

Query: 380 PADVLAGPLVLRPQPVVERPEVLQEAVRFHLPLSGQRLHRVRP 252
           P   +  P+  RP P +ERPE  + A     P+  +    + P
Sbjct: 182 PTPYIERPVPARPAPYIERPEPARPAPYIERPVPARPAPYIEP 224


>Z81568-3|CAB04592.1|  643|Caenorhabditis elegans Hypothetical
           protein K08E3.4 protein.
          Length = 643

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 380 PADVLAGPLVLRPQPVVERPEVLQEAVRF 294
           P+     P+   P+P+V +PE ++ AV +
Sbjct: 432 PSTYTPKPIAYEPEPMVYKPEAMKPAVSY 460


>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
            protein F36A2.13 protein.
          Length = 2944

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 313  STSGRSTTGCGRRTSGPASTSAGN 384
            S +  STTG G     PAS +AGN
Sbjct: 1907 SYAAGSTTGTGSTAPAPASATAGN 1930


>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
            F36A2.13 protein.
          Length = 2944

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 313  STSGRSTTGCGRRTSGPASTSAGN 384
            S +  STTG G     PAS +AGN
Sbjct: 1907 SYAAGSTTGTGSTAPAPASATAGN 1930


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,621,472
Number of Sequences: 27780
Number of extensions: 139384
Number of successful extensions: 589
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)