Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31421
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY033237-1|AAK44223.1|  467|Homo sapiens alcohol dehydrogenase 8...   189   7e-48
AK056992-1|BAB71335.1|  419|Homo sapiens protein ( Homo sapiens ...   188   1e-47
AB075879-1|BAD38661.1|   53|Homo sapiens putative protein produc...    48   4e-05

>AY033237-1|AAK44223.1|  467|Homo sapiens alcohol dehydrogenase 8
           protein.
          Length = 467

 Score =  189 bits (461), Expect = 7e-48
 Identities = 87/161 (54%), Positives = 118/161 (73%), Gaps = 1/161 (0%)
 Frame = -2

Query: 703 AKVFVRSVNNFGDVEARSSMHLAATMAGVGIGNAGVHLCHGLAYPIAGNVKSFVPEDYG- 527
           AK   R+V N  D+EARS MHLA+  AG+G GNAGVHLCHG++YPI+G VK +  +DY  
Sbjct: 291 AKYLKRAVRNPDDLEARSHMHLASAFAGIGFGNAGVHLCHGMSYPISGLVKMYKAKDYNV 350

Query: 526 SNPIIPHGLSVVMTAPAVFRFTASSDPEKHLEAASLLGADVTNDKRKDAGRILSDVILLY 347
            +P++PHGLSVV+T+PAVF FTA   PE+HLE A +LGAD    + +DAG +L+D +  +
Sbjct: 351 DHPLVPHGLSVVLTSPAVFTFTAQMFPERHLEMAEILGADTRTARIQDAGLVLADTLRKF 410

Query: 346 MDKLKIENGLKALGYTNDDIPDLVKGALPQDRLLKIAPVTQ 224
           +  L +++GL A+GY+  DIP LVKG LPQ+R+ K+AP  Q
Sbjct: 411 LFDLDVDDGLAAVGYSKADIPALVKGTLPQERVTKLAPCPQ 451


>AK056992-1|BAB71335.1|  419|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32430 fis, clone SKMUS2001129, weakly similar to
           NAD-DEPENDENT METHANOL DEHYDROGENASE (EC 1.1.1.244). ).
          Length = 419

 Score =  188 bits (459), Expect = 1e-47
 Identities = 87/161 (54%), Positives = 118/161 (73%), Gaps = 1/161 (0%)
 Frame = -2

Query: 703 AKVFVRSVNNFGDVEARSSMHLAATMAGVGIGNAGVHLCHGLAYPIAGNVKSFVPEDYG- 527
           AK   R+V N  D+EARS MHLA+  AG+G GNAGVHLCHG++YPI+G VK +  +DY  
Sbjct: 243 AKYLKRAVRNPDDLEARSHMHLASAFAGIGFGNAGVHLCHGMSYPISGLVKMYKAKDYNV 302

Query: 526 SNPIIPHGLSVVMTAPAVFRFTASSDPEKHLEAASLLGADVTNDKRKDAGRILSDVILLY 347
            +P++PHGLSVV+T+PAVF FTA   PE+HLE A +LGAD    + +DAG +L+D +  +
Sbjct: 303 DHPLVPHGLSVVLTSPAVFTFTAQMFPERHLEMAEILGADTRTARIQDAGLVLADTLRKF 362

Query: 346 MDKLKIENGLKALGYTNDDIPDLVKGALPQDRLLKIAPVTQ 224
           +  L +++GL A+GY+  DIP LVKG LPQ+R+ K+AP  Q
Sbjct: 363 LFDLDVDDGLAAVGYSKADIPALVKGTLPQERVTKLAPRPQ 403


>AB075879-1|BAD38661.1|   53|Homo sapiens putative protein product
           of HMFT2263 protein.
          Length = 53

 Score = 47.6 bits (108), Expect = 4e-05
 Identities = 20/36 (55%), Positives = 28/36 (77%)
 Frame = -2

Query: 331 IENGLKALGYTNDDIPDLVKGALPQDRLLKIAPVTQ 224
           +++GL A+GY+  DIP LVKG LPQ+R+ K+AP  Q
Sbjct: 2   VDDGLAAVGYSKADIPALVKGTLPQERVTKLAPRPQ 37


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,027,703
Number of Sequences: 237096
Number of extensions: 1571173
Number of successful extensions: 6654
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6652
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)