Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31420
(546 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811... 108 2e-24
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592... 95 2e-20
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 95 3e-20
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37... 74 9e-14
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 73 1e-13
08_02_0759 - 20851828-20851932,20852190-20852285,20853231-208533... 68 4e-12
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 65 3e-11
02_03_0404 + 18648632-18648669,18649319-18649379,18649449-186494... 43 1e-04
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 42 3e-04
01_03_0030 - 11787280-11787393,11787487-11787714,11788828-117889... 31 0.45
10_03_0040 - 7307108-7307564,7307611-7307915 31 0.79
12_02_1157 + 26565040-26565081,26565189-26565262,26565343-265654... 29 2.4
08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579 29 3.2
02_05_1303 + 35572403-35572624,35572744-35572860,35572987-355731... 28 5.6
06_01_1143 - 9554338-9554983,9555004-9555746 27 9.8
06_01_0080 + 644021-645463 27 9.8
02_05_1025 + 33588053-33589998,33590357-33590630,33591031-33591354 27 9.8
>06_03_0163 -
17380601-17380710,17380796-17380856,17381076-17381150,
17381538-17381600,17381679-17381755,17382432-17382515,
17382610-17382654,17382729-17382789,17383658-17384053,
17384220-17384289,17387010-17387083,17387202-17387246,
17387342-17387391,17387846-17387947,17388587-17388620,
17388681-17388758,17388915-17388965,17389082-17389085,
17389182-17389256,17389530-17389624
Length = 549
Score = 108 bits (260), Expect = 2e-24
Identities = 54/119 (45%), Positives = 77/119 (64%)
Frame = +3
Query: 126 STELAKRKVTNKLLEYTQNQAVLSVPQWTVQMRYYSSLPSHIKVNLPALSPTMESGSIVS 305
ST + ++ + L Q QA+ +V + +R + P H+ V +PALSPTM G+I
Sbjct: 111 STAIGPARLLWQQLIGLQQQAMGTVSACSSWIRPTARFPPHLVVGMPALSPTMNQGNIAK 170
Query: 306 WEKKEGDKLIEGDLLCEIETDKATMGFETPEESYLAKILIPAGTKGVPVGKLLCIIVGD 482
W K+EG+K+ GD++CEIETDKAT+ FE+ EE YLAKIL P G+K V VG+ + + V D
Sbjct: 171 WRKQEGEKIEVGDVICEIETDKATLEFESLEEGYLAKILAPEGSKDVQVGQPIAVTVED 229
>07_03_0044 -
12758606-12758676,12758765-12758860,12759197-12759299,
12759379-12759474,12759537-12759603,12759682-12759749,
12759898-12759973,12760112-12760197,12760285-12760361,
12761461-12761533,12761627-12761875,12761997-12762089,
12762218-12762292,12762661-12762716,12763473-12763513,
12763907-12764001,12764085-12764158,12765052-12765145,
12765484-12765519
Length = 541
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/85 (48%), Positives = 61/85 (71%)
Frame = +3
Query: 231 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEESYL 410
+ LP H ++ +P+LSPTM G+I W KKEGDK+ G++LCE+ETDKAT+ E EE YL
Sbjct: 113 ADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 172
Query: 411 AKILIPAGTKGVPVGKLLCIIVGDQ 485
AKI+ G+K + VG+++ + V ++
Sbjct: 173 AKIIHGDGSKEIKVGEIIAVTVEEE 197
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 95.1 bits (226), Expect = 3e-20
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = +3
Query: 231 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEESYL 410
+ LP H ++ +P+LSPTM G+I W KKEGDK+ G++LCE+ETDKAT+ E EE YL
Sbjct: 1616 ADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 1675
Query: 411 AKILIPAGTKGVPVGKLLCIIVGDQ 485
AKI+ G K + VG+++ + V ++
Sbjct: 1676 AKIIHGDGAKEIKVGEIIAVTVEEE 1700
>06_01_0037 -
369498-369568,369668-369760,369889-369991,370061-370156,
370227-370293,370379-370446,370606-370681,370890-370975,
371065-371150,371337-371409,371490-371735,371845-371937,
372045-372119,372496-372540,372631-372708,372805-372921,
373865-373894
Length = 500
Score = 73.7 bits (173), Expect = 9e-14
Identities = 32/65 (49%), Positives = 46/65 (70%)
Frame = +3
Query: 291 GSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEESYLAKILIPAGTKGVPVGKLLCI 470
G+I W KKEGDK+ G++LCE+ETDKAT+ E EE YLAKI+ G K + VG+++ +
Sbjct: 91 GNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDGAKEIKVGEIIAV 150
Query: 471 IVGDQ 485
V ++
Sbjct: 151 TVEEE 155
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 73.3 bits (172), Expect = 1e-13
Identities = 36/92 (39%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = +3
Query: 252 KVNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEESYLAKILIPA 431
++ +PALS TM G IVSW EGD+L +GD + +E+DKA M ET + +LA +L+PA
Sbjct: 51 EIFMPALSSTMTEGKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGFLAAVLVPA 110
Query: 432 GTKGVPVGKLLCIIV--GDQMMLRHSKISKMT 521
G + PVG + ++ D++ SK + ++
Sbjct: 111 G-ESAPVGSAIALLAESEDEIPAAQSKAASLS 141
>08_02_0759 -
20851828-20851932,20852190-20852285,20853231-20853314,
20853411-20853481,20853568-20853655,20853745-20853936,
20854044-20854931
Length = 507
Score = 68.1 bits (159), Expect = 4e-12
Identities = 31/74 (41%), Positives = 48/74 (64%)
Frame = +3
Query: 252 KVNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEESYLAKILIPA 431
++ +PALS TM G IVSW EGD++ +GD + +E+DKA M ET + +A +L+PA
Sbjct: 48 EIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVPA 107
Query: 432 GTKGVPVGKLLCII 473
G + PVG + ++
Sbjct: 108 G-ESAPVGAPIALL 120
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 65.3 bits (152), Expect = 3e-11
Identities = 31/74 (41%), Positives = 48/74 (64%)
Frame = +3
Query: 252 KVNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEESYLAKILIPA 431
++ +PALS TM G IVSW EGD++ +GD + +E+DKA M ET + +A +L+PA
Sbjct: 43 EIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVPA 102
Query: 432 GTKGVPVGKLLCII 473
G + PVG + ++
Sbjct: 103 G-ESAPVGAPIALL 115
>02_03_0404 +
18648632-18648669,18649319-18649379,18649449-18649476,
18649787-18649861,18649929-18649984,18650085-18650129,
18650224-18650475,18650586-18650680,18651114-18651204,
18651356-18651466,18651556-18651750,18651827-18652018
Length = 412
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/103 (25%), Positives = 48/103 (46%)
Frame = +3
Query: 213 VQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFET 392
V M + L + +P + ++ G++ ++ KK GD++ + + +IETDK TM +
Sbjct: 34 VFMDAHCQLGDLVDAVVPFMGESITDGTLATFLKKPGDRVEADEPIAQIETDKVTMDVAS 93
Query: 393 PEESYLAKILIPAGTKGVPVGKLLCIIVGDQMMLRHSKISKMT 521
PE + K + G P K+ I H++ S+ T
Sbjct: 94 PEAGIIEKFVASEGGIVTPGVKVAIISKSAAQSKTHTQSSEDT 136
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +3
Query: 249 IKVNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEESYLAKILIP 428
++ +P + ++ G++ ++ KK GD++ + + +IETDK T+ +PE + K +
Sbjct: 74 VEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFIAS 133
Query: 429 AGTKGVPVGKLLCI 470
G P K+ I
Sbjct: 134 EGDTVTPGTKVAII 147
>01_03_0030 -
11787280-11787393,11787487-11787714,11788828-11788916,
11789516-11789763,11789858-11790146,11790295-11790454,
11791228-11791404
Length = 434
Score = 31.5 bits (68), Expect = 0.45
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 297 IVSWEKKEGDKLIEGDLLCEIETDKATM 380
++ W EGD++ E LCE+++DKAT+
Sbjct: 52 LLRWFVTEGDQVDEFQRLCEVQSDKATI 79
>10_03_0040 - 7307108-7307564,7307611-7307915
Length = 253
Score = 30.7 bits (66), Expect = 0.79
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 198 VPQWTVQMRYYSSLPSHIKVNLPALSPTMESG 293
+PQW + + YSS PS++++ L +L+ + SG
Sbjct: 193 LPQWRRRQQDYSSTPSNLQLRLGSLTMVISSG 224
>12_02_1157 +
26565040-26565081,26565189-26565262,26565343-26565460,
26565547-26565617,26565704-26565869,26565946-26566145,
26566669-26566880,26567404-26567522,26567952-26568053,
26568144-26568253,26568340-26568427,26568574-26568606,
26568635-26568834,26568916-26569120
Length = 579
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 309 EKKEGDKLIEGDLLCEIETDKATMGFETPEESYLAKILIPAGTKGVPVGK 458
+++ DK L D+A+ GF PE+S ++K + T+ PV K
Sbjct: 19 KRRASDKPANDQSLHSAAFDRASNGFRNPEQSKISKYISTRVTEVFPVKK 68
>08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579
Length = 824
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 182 PGSSICTTMDCSDEVLFESTITYKGQPSSSFANHGEWFNCKLGKK 316
P +C D SDE +FE+ I+ PS +F + F C +G K
Sbjct: 742 PDFILCVGDDRSDEDMFEAMIS----PSPAFPETAQIFPCTVGNK 782
>02_05_1303 +
35572403-35572624,35572744-35572860,35572987-35573112,
35573217-35573279,35573837-35573944,35574587-35574664,
35574772-35574864,35575206-35575292,35575429-35575530,
35575617-35575736,35575839-35575901,35575974-35576119,
35576203-35576296,35576399-35576457,35576568-35576607,
35576694-35576785,35576877-35576946,35578172-35578333,
35578477-35578703,35578863-35579070,35579173-35579258,
35579450-35579541,35579674-35579870
Length = 883
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +3
Query: 201 PQWTVQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDK 329
P W + M+ Y PS+ ++ +P L+ + G+ + E K
Sbjct: 325 PPWLINMQRYGPPPSYPQLKIPGLNAPIPPGASFGYRPGEWGK 367
>06_01_1143 - 9554338-9554983,9555004-9555746
Length = 462
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 416 NIDSGRYK--GSACREIIVHYCWRSNDVAAFKDFKDDSS 526
NID+G K G AC IIV CW +AA K SS
Sbjct: 309 NIDAGFRKETGDACAGIIVRDCWGLVLLAACKKLPRCSS 347
>06_01_0080 + 644021-645463
Length = 480
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +3
Query: 204 QWTVQMRYYSSLPSHIKVNLPALSPTMESGSI--VSWEKKEGDKLIEGDLLCEIETDKAT 377
+WTVQ + + V P + +++S + + E+ E K+ +GD + DKA
Sbjct: 268 KWTVQQA------AELSVAAPTIEASLDSRFLSGLKDERVEAAKVFQGDFSSNLPVDKAQ 321
Query: 378 MGFETPEESYLAKI 419
+ + + Y +KI
Sbjct: 322 LIEDVRQALYASKI 335
>02_05_1025 + 33588053-33589998,33590357-33590630,33591031-33591354
Length = 847
Score = 27.1 bits (57), Expect = 9.8
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 182 PGSSICTTMDCSDEVLFESTITYKGQPSSSFANHGEWFNCKLGKK 316
P +C D SDE +FES I S E F C +GKK
Sbjct: 762 PDFVLCIGDDRSDEDMFES-IVCPSNSSVKLPASSEVFACTVGKK 805
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,955,824
Number of Sequences: 37544
Number of extensions: 311031
Number of successful extensions: 845
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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