Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31419
         (663 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070984-1|AAL48606.1|  224|Drosophila melanogaster RE07960p pro...    80   2e-15
AE014296-2486|AAN11795.1|  224|Drosophila melanogaster CG32147-P...    80   2e-15

>AY070984-1|AAL48606.1|  224|Drosophila melanogaster RE07960p
           protein.
          Length = 224

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
 Frame = +2

Query: 167 KPIIMVTGFGPFANHP-VNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDEFVPAL 343
           + +I+V+GFGPF  H  VNASWEAVKLL +    +    +L    + V Y  VDE V  +
Sbjct: 6   RKLIVVSGFGPFLGHEAVNASWEAVKLLPEILTHDGIEYDLEKRLVSVEYGAVDEAVAEI 65

Query: 344 WETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANHVCTADG---AVRIHT 514
           W+   P L+IHVGVS +A  + +E  A+   ++R D  DK  AN  C       A  + T
Sbjct: 66  WKRQ-PYLVIHVGVSGVAKCVYIEKLAYNHKFRRADNCDKKLANGTCELPNNGHANVLKT 124

Query: 515 KLNVERICKEFND 553
           +L+V++I    N+
Sbjct: 125 ELDVDKIVAVVNE 137



 Score = 28.7 bits (61), Expect = 7.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 561 LEDSTRAVSSKDAGRYLCEYIYYTSLSVD 647
           L+  +   +SK+ G +LC YIY  SL +D
Sbjct: 155 LKSLSATKASKNVGDFLCGYIYLKSLDMD 183


>AE014296-2486|AAN11795.1|  224|Drosophila melanogaster CG32147-PA
           protein.
          Length = 224

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
 Frame = +2

Query: 167 KPIIMVTGFGPFANHP-VNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDEFVPAL 343
           + +I+V+GFGPF  H  VNASWEAVKLL +    +    +L    + V Y  VDE V  +
Sbjct: 6   RKLIVVSGFGPFLGHEAVNASWEAVKLLPEILTHDGIEYDLEKRLVSVEYGAVDEAVAEI 65

Query: 344 WETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANHVCTADG---AVRIHT 514
           W+   P L+IHVGVS +A  + +E  A+   ++R D  DK  AN  C       A  + T
Sbjct: 66  WKRQ-PYLVIHVGVSGVAKCVYIEKLAYNHKFRRADNCDKKLANGTCELPNNGHANVLKT 124

Query: 515 KLNVERICKEFND 553
           +L+V++I    N+
Sbjct: 125 ELDVDKIVAVVNE 137



 Score = 28.7 bits (61), Expect = 7.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 561 LEDSTRAVSSKDAGRYLCEYIYYTSLSVD 647
           L+  +   +SK+ G +LC YIY  SL +D
Sbjct: 155 LKSLSATKASKNVGDFLCGYIYLKSLDMD 183


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,777,959
Number of Sequences: 53049
Number of extensions: 596219
Number of successful extensions: 1734
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1730
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)