Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31410
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538 141 5e-34
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006 140 7e-34
05_01_0043 - 295041-295173,296252-296537,296616-296697 140 9e-34
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062... 139 2e-33
01_07_0267 + 42410174-42410252,42410679-42411097 129 2e-30
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252... 60 2e-09
06_03_0363 + 19904002-19905792 32 0.49
09_06_0223 + 21659549-21659729,21659888-21659979 31 0.64
03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319 31 0.64
04_03_0301 + 14094370-14094584,14096694-14096727,14098084-140980... 30 1.5
09_01_0019 + 403078-404211 30 2.0
05_05_0070 + 22148595-22148907,22148988-22149104,22149196-221493... 30 2.0
07_03_1215 + 24937016-24937229,24937418-24937623,24938135-249382... 29 2.6
10_08_0401 + 17629912-17630376 29 3.4
08_02_0341 + 15994817-15994852,15995371-15995439,15995667-159959... 29 3.4
07_03_0800 + 21600050-21600106,21601506-21602663,21603029-21603520 29 4.5
06_02_0044 - 10913591-10913720,10914268-10914572,10915191-109153... 29 4.5
06_01_0409 + 2926072-2926275,2926423-2926484,2926598-2926638,292... 28 6.0
05_03_0591 + 15892772-15893412,15893478-15893910 28 6.0
02_05_0042 + 25351648-25351724,25351983-25352010,25352311-253523... 28 6.0
11_06_0610 - 25449085-25453284 28 7.9
11_06_0478 + 24073295-24074172,24074790-24075090 28 7.9
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 28 7.9
>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
Length = 165
Score = 141 bits (341), Expect = 5e-34
Identities = 65/102 (63%), Positives = 83/102 (81%), Gaps = 1/102 (0%)
Frame = +2
Query: 95 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 274
PFFG +GAASA+IFS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 275 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAI 397
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AI
Sbjct: 72 IAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAI 113
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/41 (82%), Positives = 35/41 (85%)
Frame = +1
Query: 400 IVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 522
IVGDAGVR AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 115 IVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIIL 155
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 89 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 262
Y F G +S + G A G A G A + + +P+L + I+ ++ A +A+
Sbjct: 87 YYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146
Query: 263 YGLVVAVLIA 292
YGL+V ++++
Sbjct: 147 YGLIVGIILS 156
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 436 QPRLFVGMILILIFAEVLGLYGLIVAIYL 522
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 48 RPELVMKSIVPVVMAGVLGIYGLIIAVII 76
>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
Length = 165
Score = 140 bits (340), Expect = 7e-34
Identities = 64/102 (62%), Positives = 83/102 (81%), Gaps = 1/102 (0%)
Frame = +2
Query: 95 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 274
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 275 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAI 397
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AI
Sbjct: 72 IAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAI 113
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/41 (82%), Positives = 35/41 (85%)
Frame = +1
Query: 400 IVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 522
IVGDAGVR AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 115 IVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIIL 155
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 89 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 262
Y F G +S + G A G A G A + + +P+L + I+ ++ A +A+
Sbjct: 87 YYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146
Query: 263 YGLVVAVLIA 292
YGL+V ++++
Sbjct: 147 YGLIVGIILS 156
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 436 QPRLFVGMILILIFAEVLGLYGLIVAIYL 522
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 48 RPELVMKSIVPVVMAGVLGIYGLIIAVII 76
>05_01_0043 - 295041-295173,296252-296537,296616-296697
Length = 166
Score = 140 bits (339), Expect = 9e-34
Identities = 64/102 (62%), Positives = 83/102 (81%), Gaps = 1/102 (0%)
Frame = +2
Query: 95 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 274
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 13 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 72
Query: 275 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAI 397
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AI
Sbjct: 73 IAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAI 114
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/41 (82%), Positives = 35/41 (85%)
Frame = +1
Query: 400 IVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 522
IVGDAGVR AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 116 IVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIIL 156
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +2
Query: 80 NPIYGPFF---GVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVM 244
NP P+F G +S + G A G A G A + + +P+L + I+ ++
Sbjct: 82 NPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIF 141
Query: 245 AGIIAIYGLVVAVLIA 292
A +A+YGL+V ++++
Sbjct: 142 AEALALYGLIVGIILS 157
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 436 QPRLFVGMILILIFAEVLGLYGLIVAIYL 522
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 49 RPELVMKSIVPVVMAGVLGIYGLIIAVII 77
>02_04_0181 -
20705307-20705439,20705991-20706037,20706181-20706229,
20706685-20707055
Length = 199
Score = 139 bits (336), Expect = 2e-33
Identities = 63/102 (61%), Positives = 83/102 (81%), Gaps = 1/102 (0%)
Frame = +2
Query: 95 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 274
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 14 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 73
Query: 275 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAI 397
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AI
Sbjct: 74 IAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAI 115
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +1
Query: 418 VRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 522
+R AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 155 LRANAQQPKLFVGMILILIFAEALALYGLIVGIIL 189
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 436 QPRLFVGMILILIFAEVLGLYGLIVAIYL 522
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 50 RPELVMKSIVPVVMAGVLGIYGLIIAVII 78
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/33 (27%), Positives = 23/33 (69%)
Frame = +2
Query: 194 SVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA 292
+ +P+L + I+ ++ A +A+YGL+V ++++
Sbjct: 158 NAQQPKLFVGMILILIFAEALALYGLIVGIILS 190
>01_07_0267 + 42410174-42410252,42410679-42411097
Length = 165
Score = 129 bits (311), Expect = 2e-30
Identities = 61/108 (56%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +2
Query: 77 NNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII 256
N + PF G +GAA A++FS +GAAYGTA+SG G+A M VMRPEL+MKSI+PVVMAG++
Sbjct: 6 NGDEFAPFLGFIGAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVMAGVL 65
Query: 257 AIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAI 397
IYGL++AV+I + A Y + G +HL AGLA G LAAG AI
Sbjct: 66 GIYGLIIAVIITTGINPTAMPYYHFDGSVHLAAGLATGLCALAAGLAI 113
Score = 71.3 bits (167), Expect = 6e-13
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = +1
Query: 400 IVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 522
+VGDAGVR AQQP+LFVGMILILIFAE LGLYGLIV I L
Sbjct: 115 VVGDAGVRANAQQPKLFVGMILILIFAEALGLYGLIVGIIL 155
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +2
Query: 113 GAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA 292
G A+ + A G A G G+ A + +P+L + I+ ++ A + +YGL+V ++++
Sbjct: 99 GLATGLCALAAGLAIGVV-GDAGVRA-NAQQPKLFVGMILILIFAEALGLYGLIVGIILS 156
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 436 QPRLFVGMILILIFAEVLGLYGLIVAIYL 522
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 48 RPELVMKSIVPVVMAGVLGIYGLIIAVII 76
>01_05_0664 +
24122958-24123070,24123184-24123261,24125040-24125210,
24125288-24125456
Length = 176
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Frame = +2
Query: 101 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 280
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIYG++VA
Sbjct: 20 FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 79
Query: 281 VLIAGALQEP----ANYP--LYKGFIHLGAGLAVGFSGLAAGFAI 397
+++ L+ ++P L G+ +GL VGF+ L G +
Sbjct: 80 IILQTKLESVPTALVHHPESLRAGYAIFASGLIVGFANLVCGVCV 124
Score = 35.9 bits (79), Expect = 0.030
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 400 IVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 522
I+G + AQ LFV +++I IF LGL+G+IV I +
Sbjct: 126 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIM 166
Score = 31.1 bits (67), Expect = 0.85
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 400 IVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 522
I G + + + PR+ ++ +IF E + +YG+IVAI L
Sbjct: 42 ITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIIL 82
>06_03_0363 + 19904002-19905792
Length = 596
Score = 31.9 bits (69), Expect = 0.49
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Frame = +2
Query: 83 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTG-----IAAMSVMRPELIMKSIIPVVMA 247
PIY +GAA +FS+L + T +A ++R + + P +
Sbjct: 400 PIYATVAVTLGAACVALFSSLDVLASVSSISTLFIFALVAVALLVRRYHVAGATTPGQLR 459
Query: 248 GIIAIYGLVVAVLIAGALQEPANYPL-YKGFIHLGAGLAVGFSGLAA 385
+A LVV I + + Y + G+ G G A G +GLAA
Sbjct: 460 TFLAFLALVVLSSIGVSAYYNSRYARRWPGYAAFGCGWAAGAAGLAA 506
>09_06_0223 + 21659549-21659729,21659888-21659979
Length = 90
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -2
Query: 646 QGGPG-YRRRPSLCASSDSDNEHRGSEHGRRE 554
+GG G ++RR S DNE +G +HGRRE
Sbjct: 29 EGGVGVWQRRKRDTNGSGKDNEGKGGQHGRRE 60
>03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319
Length = 317
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +1
Query: 292 WCPPGASQLPPLQRVH---PLGCWFGCRILWSGCRFRHSIVGD 411
W PPG +LPPL +H P+ W R + R H IV D
Sbjct: 44 WAPPGEPRLPPLLLIHGFGPMATWQWRRQVGPFSRRFHIIVPD 86
>04_03_0301 +
14094370-14094584,14096694-14096727,14098084-14098095,
14098400-14098574,14099064-14099299,14099396-14100457
Length = 577
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 361 SQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDR 233
S+ ++ E KG+VG SNQ HD T D +T D++
Sbjct: 190 SRLDNKIAEVDTKGIVG-TKPSASNQHQHDGTTDSRHTVEDEK 231
>09_01_0019 + 403078-404211
Length = 377
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = -2
Query: 274 DQTVDGNNTRHDDRNDRLHDQLRPHHRHXXXXXXXXXXXXXXXXGAEDDSRRRPHNSKEG 95
D T D + + +DR R H + + HHR + SRRR H E
Sbjct: 293 DDTSDEDESGGEDRRRRRHRKRQHHHRKGASDGDSGSGASDSADDRKRSSRRRRHRKSES 352
Query: 94 S 92
S
Sbjct: 353 S 353
>05_05_0070 +
22148595-22148907,22148988-22149104,22149196-22149350,
22149987-22150061,22150179-22150469,22150942-22151292,
22151390-22151794
Length = 568
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +1
Query: 187 RHVGDEA*ADHEVDHSCRHGGYYCHLRSGRGCPDCWCPP 303
R V + AD D CR G SG + +CPP
Sbjct: 16 REVSEALTADSSADEECRRGSSSSSASSGDASSESYCPP 54
>07_03_1215 +
24937016-24937229,24937418-24937623,24938135-24938207,
24938619-24938812
Length = 228
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 393 AKPAARPENPTAKPAPKWM 337
AKPAA+P+ P KP P+ M
Sbjct: 93 AKPAAKPKKPPVKPLPEMM 111
>10_08_0401 + 17629912-17630376
Length = 154
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 107 VMGAASAIIFSALGAAYGTAKSGTGIAA 190
V GAA+ F+AL AY A+ G+AA
Sbjct: 111 VAGAAAVAAFAALAVAYAVARRRVGVAA 138
>08_02_0341 +
15994817-15994852,15995371-15995439,15995667-15995973,
15996231-15996253
Length = 144
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 298 GTSNQDSHDQTVDGNNTRHDDRNDRL 221
G + + HD ++DG N +DD D L
Sbjct: 98 GAEDDNGHDVSIDGLNANNDDNGDEL 123
>07_03_0800 + 21600050-21600106,21601506-21602663,21603029-21603520
Length = 568
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Frame = -3
Query: 612 CARLQTQIMSIEA--RSTGDGSGVCSGR 535
C+R++TQ+ ++A R+TG G G +GR
Sbjct: 529 CSRMKTQMSKMKAARRATGGGGGAAAGR 556
>06_02_0044 -
10913591-10913720,10914268-10914572,10915191-10915391,
10916620-10917042
Length = 352
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 510 DDKSVKTQYFSENKNKNHSDE*PRLLSSTTHACISHDA-MAKPAARPENPTAKP 352
DD + + + S+ +SDE P+L+ T +S D+ M+ P A+ ++ P
Sbjct: 188 DDAGIDSYFESKEIPSGNSDEQPKLMQPVTSNAVSADSGMSIPGAKGDSSLCIP 241
>06_01_0409 +
2926072-2926275,2926423-2926484,2926598-2926638,
2927165-2927394
Length = 178
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 316 LPPLQRVHPLGCWFGCRILWSGCRFRHSIVGDAGVRGTAQQPRLFVG 456
L P R+ L +G RI+ +GC + S+V QQPR+ VG
Sbjct: 20 LDPFVRITNLSVSYGARIVSNGCELKPSMV--------TQQPRVVVG 58
>05_03_0591 + 15892772-15893412,15893478-15893910
Length = 357
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 550 CVFRAFILCTGRWRR*VRKDPILQRK 473
C RA ++C RWRR + DP QR+
Sbjct: 28 CAVRASLVCK-RWRRLLTDDPCFQRR 52
>02_05_0042 +
25351648-25351724,25351983-25352010,25352311-25352373,
25352880-25352945,25353029-25353076,25353338-25353379,
25353499-25353714,25354066-25354188,25354352-25354564,
25354930-25355016,25355259-25355507,25356386-25356507,
25357135-25357225,25358467-25358882,25359489-25359609
Length = 653
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 340 PLGCWFGCRILWSGCRFRHSIVGD 411
P GC GC +L C++ HSI+ +
Sbjct: 553 PEGCLQGCSLLHIACQYGHSIMAE 576
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -3
Query: 441 RLLSSTTHACISHDAMAKPAARPENPTAKPAP 346
R + + H C H KP+ PE P P P
Sbjct: 404 RPVDCSKHVCPGHPTPGKPSEPPEKPPLIPVP 435
>11_06_0478 + 24073295-24074172,24074790-24075090
Length = 392
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 346 GCWFGCRILWSGCRFRHS 399
G W GC +LW G + HS
Sbjct: 269 GPWQGCSVLWQGALYVHS 286
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 394 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTS 290
G G S+T VD+P VVGW GTS
Sbjct: 4 GGGGGSLPPFLSKTYEMVDDPSTDAVVGWTPAGTS 38
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,668,056
Number of Sequences: 37544
Number of extensions: 521965
Number of successful extensions: 1811
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1802
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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