Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31410
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 141 5e-34
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 141 5e-34
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 141 5e-34
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 141 5e-34
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 133 1e-31
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 133 1e-31
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 50 2e-06
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 33 0.14
AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical ... 32 0.33
AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical ... 32 0.33
Z83122-1|CAB05597.1| 293|Caenorhabditis elegans Hypothetical pr... 31 0.57
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 30 1.7
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 29 3.0
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 29 3.0
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 4.0
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 29 4.0
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 4.0
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 29 4.0
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 4.0
U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 28 5.3
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 28 7.0
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 28 7.0
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 27 9.3
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 141 bits (341), Expect = 5e-34
Identities = 70/104 (67%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = +2
Query: 89 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 268
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 269 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLAAGFAI 397
LVVA+++ G + A Y L KGF HL AGL G GL AG+AI
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAI 116
Score = 80.6 bits (190), Expect = 9e-16
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +1
Query: 361 CRILWSGCRFRHSIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 522
C + G + IVGDAGVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 105 CGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 101 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 280
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 281 VLI 289
+++
Sbjct: 156 LIL 158
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 436 QPRLFVGMILILIFAEVLGLYGLIVAIYL 522
+P L + ++ +I A ++G+YGL+VA+ L
Sbjct: 51 RPELIMKSVIPVIMAGIIGIYGLVVAMVL 79
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 141 bits (341), Expect = 5e-34
Identities = 70/104 (67%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = +2
Query: 89 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 268
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 269 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLAAGFAI 397
LVVA+++ G + A Y L KGF HL AGL G GL AG+AI
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAI 116
Score = 80.6 bits (190), Expect = 9e-16
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +1
Query: 361 CRILWSGCRFRHSIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 522
C + G + IVGDAGVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 105 CGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 101 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 280
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 281 VLI 289
+++
Sbjct: 156 LIL 158
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 436 QPRLFVGMILILIFAEVLGLYGLIVAIYL 522
+P L + ++ +I A ++G+YGL+VA+ L
Sbjct: 51 RPELIMKSVIPVIMAGIIGIYGLVVAMVL 79
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 141 bits (341), Expect = 5e-34
Identities = 70/104 (67%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = +2
Query: 89 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 268
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 269 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLAAGFAI 397
LVVA+++ G + A Y L KGF HL AGL G GL AG+AI
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAI 116
Score = 80.6 bits (190), Expect = 9e-16
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +1
Query: 361 CRILWSGCRFRHSIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 522
C + G + IVGDAGVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 105 CGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 101 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 280
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 281 VLI 289
+++
Sbjct: 156 LIL 158
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 436 QPRLFVGMILILIFAEVLGLYGLIVAIYL 522
+P L + ++ +I A ++G+YGL+VA+ L
Sbjct: 51 RPELIMKSVIPVIMAGIIGIYGLVVAMVL 79
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 141 bits (341), Expect = 5e-34
Identities = 70/104 (67%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = +2
Query: 89 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 268
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 269 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLAAGFAI 397
LVVA+++ G + A Y L KGF HL AGL G GL AG+AI
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAI 116
Score = 80.6 bits (190), Expect = 9e-16
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +1
Query: 361 CRILWSGCRFRHSIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 522
C + G + IVGDAGVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 105 CGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 101 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 280
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 281 VLI 289
+++
Sbjct: 156 LIL 158
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 436 QPRLFVGMILILIFAEVLGLYGLIVAIYL 522
+P L + ++ +I A ++G+YGL+VA+ L
Sbjct: 51 RPELIMKSVIPVIMAGIIGIYGLVVAMVL 79
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 133 bits (321), Expect = 1e-31
Identities = 62/105 (59%), Positives = 81/105 (77%), Gaps = 1/105 (0%)
Frame = +2
Query: 86 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 265
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 266 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAI 397
GLVVAV+++G ++ ANY + F GL G GL AG+AI
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAI 124
Score = 73.3 bits (172), Expect = 1e-13
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = +1
Query: 361 CRILWSGCRFRHSIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 522
C + G + I GDAGVR +QQPR+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 113 CGLCGLGAGYAIGIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALIL 166
Score = 34.7 bits (76), Expect = 0.061
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 143 LGAAYGTAKSG-TGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGA 298
LGA Y +G G+ A+S +P + + I+ ++ A ++ +YG++VA LI GA
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVA-LILGA 168
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 133 bits (321), Expect = 1e-31
Identities = 62/105 (59%), Positives = 81/105 (77%), Gaps = 1/105 (0%)
Frame = +2
Query: 86 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 265
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 266 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAI 397
GLVVAV+++G ++ ANY + F GL G GL AG+AI
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAI 124
Score = 73.3 bits (172), Expect = 1e-13
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = +1
Query: 361 CRILWSGCRFRHSIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 522
C + G + I GDAGVR +QQPR+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 113 CGLCGLGAGYAIGIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALIL 166
Score = 34.7 bits (76), Expect = 0.061
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 143 LGAAYGTAKSG-TGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGA 298
LGA Y +G G+ A+S +P + + I+ ++ A ++ +YG++VA LI GA
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVA-LILGA 168
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Frame = +2
Query: 110 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 289
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 290 AGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGFAI 397
G L E + P L G++ G GL VG S L G A+
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAV 163
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 382 CRFRHSIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 516
C IVG A P LFV +++I IFA +GL+G+I+ I
Sbjct: 159 CGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFGMIIGI 203
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Frame = +2
Query: 110 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 289
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 290 AGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGFAI 397
G L E + P L G++ G GL VG S L G A+
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAV 163
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 382 CRFRHSIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 516
C IVG A P LFV +++I IFA +GL+G+I+ I
Sbjct: 159 CGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFGMIIGI 203
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 223 VDHSCRHGGYYCHLRSGRGCPDCWCPPG 306
V H C +GG+ + S R P C CP G
Sbjct: 1800 VGHECLNGGFCSYANSNRSLPHCICPSG 1827
>AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical
protein T22E7.1b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 322 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 224
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical
protein T22E7.1a protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 322 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 224
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>Z83122-1|CAB05597.1| 293|Caenorhabditis elegans Hypothetical
protein R11A5.2 protein.
Length = 293
Score = 31.5 bits (68), Expect = 0.57
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = -3
Query: 657 ETLCKVDPVTGDDHPCARLQTQIMSIEARSTGDGSGVCSGRL---FCVQVDGDDKSVKTQ 487
ET+ K+D V DD+ + ++Q +S TG G+G C R+ +V+ D + T
Sbjct: 220 ETIAKIDEVRIDDNKNIQEKSQRVS-----TGTGAGACINRIVKDLMTKVERLDSILSTI 274
Query: 486 YFSENKNKNHS 454
S N + N+S
Sbjct: 275 RVSNNSSNNNS 285
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Frame = +3
Query: 3 ECVQIVITVFGTCKYSHI*QTKWLKIIQS-------TDPSLELWGRRLLSSSAPWELPME 161
E V ++ F TC + + T + +QS ++ W R +L +PW L M+
Sbjct: 284 EAVPLLGVFFHTCNFISVLATSFTVYVQSFHFRNQHVHERMDFWMRFILLEWSPWLLRMK 343
Query: 162 LPSQE 176
+P +E
Sbjct: 344 MPDRE 348
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -3
Query: 522 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAMAKPAARP 373
++DG++ K + K KNH+D P LL ST+ + ++ D + + P
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDEDSLIP 609
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -3
Query: 522 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAMAKPAARP 373
++DG++ K + K KNH+D P LL ST+ + ++ D + + P
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDEDSLIP 609
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 253 YCHLRSGRGCPDCWCPPGASQ 315
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 235 CRHGGYYCHLRSGRGCPDCWCPPGASQ 315
C HG Y ++ SG GC +C C P S+
Sbjct: 915 CAHGFY--NITSGLGCQECNCDPLGSE 939
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 253 YCHLRSGRGCPDCWCPPGASQ 315
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -3
Query: 522 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHD 400
++DG++ K + K KNH+D P LL ST+ + ++ D
Sbjct: 511 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSD 554
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 253 YCHLRSGRGCPDCWCPPGASQ 315
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical
protein C32E8.5 protein.
Length = 299
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -2
Query: 382 SQTRESYSQTSTQVDE-PFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLR 206
S++R+ ++ T+ D+ P +K V E S+ DS + D R DDR D D R
Sbjct: 24 SRSRDRQTRRDTRRDDSPKIKREVKE--EQFSDNDSPRRRRDDRGGRRDDRRDNRRDDRR 81
Query: 205 PH 200
H
Sbjct: 82 DH 83
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 203 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLY 328
RPE ++ +VMA + AIY + +++ L NY LY
Sbjct: 35 RPEYGSYKLLMMVMATLYAIYSAIEVIILPSYLVFEYNYLLY 76
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +1
Query: 256 CHLRSGR-GCPDCWCPPGASQLPP 324
C L + R GCP C CPP PP
Sbjct: 933 CQLVNDRSGCPFCSCPPVKQASPP 956
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 235 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 360
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 235 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 360
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 325 LQRVHPLGCWFGCRILWSGCRFRHSIVG 408
L +HP+G FG SG R R+ IVG
Sbjct: 1111 LSSIHPIGTSFGRVTAESGYRIRYYIVG 1138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,298,469
Number of Sequences: 27780
Number of extensions: 395441
Number of successful extensions: 1324
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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