Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31409
(579 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 366 e-102
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 366 e-102
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 366 e-102
Z82053-6|CAB04832.1| 106|Caenorhabditis elegans Hypothetical pr... 91 7e-19
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 83 2e-16
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 78 5e-15
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 49 3e-06
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 39 0.002
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 29 3.2
AF016450-8|AAB65993.1| 578|Caenorhabditis elegans Hypothetical ... 29 3.2
Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical pr... 27 7.3
AL021466-1|CAA16282.1| 308|Caenorhabditis elegans Hypothetical ... 27 9.6
AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical ... 27 9.6
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 366 bits (901), Expect = e-102
Identities = 175/192 (91%), Positives = 187/192 (97%)
Frame = +2
Query: 2 FNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPY 181
FN D+KKKL+CIYVA+GQKRSTVAQIVKRLTDAGA++YTI+VSATASDAAPLQ+LAPY
Sbjct: 190 FNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPY 249
Query: 182 SGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 361
SGCAMGE FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER
Sbjct: 250 SGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 309
Query: 362 AAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVG 541
AAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAINVG
Sbjct: 310 AAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVG 369
Query: 542 LSVSRVGSAAQT 577
LSVSRVGSAAQT
Sbjct: 370 LSVSRVGSAAQT 381
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 366 bits (901), Expect = e-102
Identities = 175/192 (91%), Positives = 187/192 (97%)
Frame = +2
Query: 2 FNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPY 181
FN D+KKKL+CIYVA+GQKRSTVAQIVKRLTDAGA++YTI+VSATASDAAPLQ+LAPY
Sbjct: 182 FNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPY 241
Query: 182 SGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 361
SGCAMGE FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER
Sbjct: 242 SGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 301
Query: 362 AAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVG 541
AAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAINVG
Sbjct: 302 AAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVG 361
Query: 542 LSVSRVGSAAQT 577
LSVSRVGSAAQT
Sbjct: 362 LSVSRVGSAAQT 373
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 366 bits (901), Expect = e-102
Identities = 175/192 (91%), Positives = 187/192 (97%)
Frame = +2
Query: 2 FNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPY 181
FN D+KKKL+CIYVA+GQKRSTVAQIVKRLTDAGA++YTI+VSATASDAAPLQ+LAPY
Sbjct: 217 FNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPY 276
Query: 182 SGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 361
SGCAMGE FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER
Sbjct: 277 SGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 336
Query: 362 AAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVG 541
AAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAINVG
Sbjct: 337 AAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVG 396
Query: 542 LSVSRVGSAAQT 577
LSVSRVGSAAQT
Sbjct: 397 LSVSRVGSAAQT 408
>Z82053-6|CAB04832.1| 106|Caenorhabditis elegans Hypothetical
protein T26E3.7 protein.
Length = 106
Score = 90.6 bits (215), Expect = 7e-19
Identities = 40/50 (80%), Positives = 48/50 (96%)
Frame = +2
Query: 113 INYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQA 262
++YTI+VSATASDAAPL++LAPYSGCA+GE F DNGKHALII+DDLSK+A
Sbjct: 1 MDYTIVVSATASDAAPLKFLAPYSGCAIGEHFLDNGKHALIIFDDLSKKA 50
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 82.6 bits (195), Expect = 2e-16
Identities = 49/178 (27%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Frame = +2
Query: 41 IYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDN- 217
++ A+G T + + G+++ + A+D + + P EFF +
Sbjct: 222 VFAAMGVNMETARFFKQDFEECGSMDNVCLFLNLANDPTIERIITPRIALTAAEFFAYHC 281
Query: 218 GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGS 397
GKH L++ D+S A A R++S PGR +PG ++ + + ERA ++ + GS
Sbjct: 282 GKHVLVVLTDMSSYAEALREISAAREEVPGRRGFPGYMYTDLATIYERAGRVKGR--EGS 339
Query: 398 LTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAA 571
+T +P++ D++ IP IT+GQI+++ +L + I P I+V S+SR+ +A
Sbjct: 340 ITQIPILTMPNNDITHPIPDLTGYITEGQIYIDKQLHKRLIYPPIDVLPSLSRLMKSA 397
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 77.8 bits (183), Expect = 5e-15
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 1/185 (0%)
Frame = +2
Query: 20 EKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMG 199
E+ ++ A+G T + + G++ + A+D + + P
Sbjct: 203 EQTNFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRIALTSA 262
Query: 200 EFFRDN-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMS 376
EF KH L++ D+S A A R++S PGR +PG ++ + + ERA ++
Sbjct: 263 EFLAYQCKKHVLVVLTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE 322
Query: 377 DKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSR 556
+ GS+T +P++ D++ IP IT+GQI+++ +L + I P INV S+SR
Sbjct: 323 GR--DGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRLIYPPINVLPSLSR 380
Query: 557 VGSAA 571
+ +A
Sbjct: 381 LMKSA 385
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 48.8 bits (111), Expect = 3e-06
Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 12/183 (6%)
Frame = +2
Query: 41 IYVAIGQKRSTVAQIVKRLTD---------AGAINYTIIVSATASDAAPLQYLAPYSGCA 193
IYV G++ + ++++++ + + T +V+ T++ + + Y+G
Sbjct: 262 IYVGCGERGNEMSEVLRDFPELTMEVEGVTTSIMKRTALVANTSNMPVAAREASIYTGIT 321
Query: 194 MGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK- 370
+ E+FRD G + ++ D S+ A A R++S L P YP + + ERA +
Sbjct: 322 LAEYFRDMGLNVAMMADSTSRWAEALREISGRLGEMPADSGYPAYLAARLASFYERAGRV 381
Query: 371 --MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGL 544
+ GS+T + + GD + + + + I L+ +L + P+IN +
Sbjct: 382 KCLGSPEREGSVTIVGAVSPPGGDFADPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLI 441
Query: 545 SVS 553
S S
Sbjct: 442 SYS 444
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 39.1 bits (87), Expect = 0.002
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Frame = +2
Query: 182 SGCAMGEFFRDN-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 358
+G + E+FRD G+ L+ D++ + A ++S LL R P Y + + E
Sbjct: 294 TGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQE 353
Query: 359 RAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV 538
R GS+T++ I A D++ P + D L + I PA++
Sbjct: 354 RITTTKK----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELAIYPAVDP 409
Query: 539 GLSVSRV 559
S SR+
Sbjct: 410 LDSTSRI 416
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +1
Query: 25 EEVVLHLCCHWTEEVYCSSNCEEI--D*CWCHQLHNHRVCHRFRCCSPAIPGSLLWLCHG 198
+++ LC E+ Y + + D W + H++C RFRC S + L L G
Sbjct: 696 DKIAKMLCLR--EKAYADKKWQHVSEDLAWLSDIKIHQLCERFRCTSKFLLNEQLALKSG 753
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +1
Query: 25 EEVVLHLCCHWTEEVYCSSNCEEI--D*CWCHQLHNHRVCHRFRCCSPAIPGSLLWLCHG 198
+++ LC E+ Y + + D W + H++C RFRC S + L L G
Sbjct: 696 DKIAKMLCLR--EKAYADKKWQHVSEDLAWLSDIKIHQLCERFRCTSKFLLNEQLALKSG 753
>AF016450-8|AAB65993.1| 578|Caenorhabditis elegans Hypothetical
protein B0238.7 protein.
Length = 578
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 161 LQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQM 280
+ Y Y C M + F+ NG+ L IYDD++K + Y+Q+
Sbjct: 526 MYYKIDYPTCEMSDNFQ-NGR--LRIYDDINKNSKKYQQI 562
>Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical
protein T25E12.5 protein.
Length = 300
Score = 27.5 bits (58), Expect = 7.3
Identities = 7/32 (21%), Positives = 18/32 (56%)
Frame = -2
Query: 227 RVCHYHGKIHPWHNQSKEPGIAGEQHRKRWQT 132
++ H+ G PW++ + G+ +H ++W +
Sbjct: 208 KIVHFIGAQKPWNSPPSDSGLHKNEHYQQWHS 239
>AL021466-1|CAA16282.1| 308|Caenorhabditis elegans Hypothetical
protein VF36H2L.1 protein.
Length = 308
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +3
Query: 171 WLLTLV---VPWVNFSVIMANTPLLSTTIC 251
WL++L+ + W+ S ++ +T LLS T+C
Sbjct: 42 WLVSLLFSSLAWLGLSTVLPDTFLLSLTVC 71
>AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.14 protein.
Length = 468
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 61 EEVYCSSNCEEID*CWCHQLHNHRVCHRFRCCSPAI 168
EE C E+I C + + RFRCC I
Sbjct: 271 EETKCQEPVEKIFELTCSECMTKQTVERFRCCKTCI 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,744,454
Number of Sequences: 27780
Number of extensions: 296706
Number of successful extensions: 786
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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