Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31402
(649 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 24 1.5
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 24 1.5
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 4.4
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 7.8
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 7.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 7.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 7.8
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 7.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 7.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 7.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 7.8
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 7.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 7.8
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 7.8
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -3
Query: 449 VIRLFIGKNLTAGHIDFLHRQKWVFLLHAGPKILVTTRP 333
++R+F+G D ++ QK+ +L + VT RP
Sbjct: 516 MMRIFLGPAFDEIKHDMVYLQKYFYLFMEMDRFAVTLRP 554
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3
Query: 407 IDFLHRQKWVF 375
+DFLH+QK +F
Sbjct: 30 MDFLHKQKKIF 40
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -3
Query: 449 VIRLFIGKNLTAGHIDFLHRQKWVFLLHAGPKILVTTRP 333
++R+F+G D ++ QK+ +L + VT RP
Sbjct: 516 MMRIFLGPAFDEIKHDMVYLQKYFYLFMEMDRFAVTLRP 554
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3
Query: 407 IDFLHRQKWVF 375
+DFLH+QK +F
Sbjct: 30 MDFLHKQKKIF 40
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.2 bits (45), Expect = 4.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 414 CRKVFTDK*AYHMYLQSH 467
C+K F K Y +L+SH
Sbjct: 67 CQKAFDQKNLYQSHLRSH 84
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.4 bits (43), Expect = 7.8
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -1
Query: 223 YPLSTCIFYMDT 188
YPL+ C++Y T
Sbjct: 298 YPLTGCLYYFST 309
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/43 (23%), Positives = 20/43 (46%)
Frame = -3
Query: 263 KWCRESNTHINISLSIKYMYFLHGYQVSSQSVPIDIYNVKAPP 135
K+ +N + N + + K + + + + VP+ IY PP
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPP 132
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/43 (23%), Positives = 20/43 (46%)
Frame = -3
Query: 263 KWCRESNTHINISLSIKYMYFLHGYQVSSQSVPIDIYNVKAPP 135
K+ +N + N + + K + + + + VP+ IY PP
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPP 132
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/43 (23%), Positives = 20/43 (46%)
Frame = -3
Query: 263 KWCRESNTHINISLSIKYMYFLHGYQVSSQSVPIDIYNVKAPP 135
K+ +N + N + + K + + + + VP+ IY PP
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPP 132
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/43 (23%), Positives = 20/43 (46%)
Frame = -3
Query: 263 KWCRESNTHINISLSIKYMYFLHGYQVSSQSVPIDIYNVKAPP 135
K+ +N + N + + K + + + + VP+ IY PP
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPP 132
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/43 (23%), Positives = 20/43 (46%)
Frame = -3
Query: 263 KWCRESNTHINISLSIKYMYFLHGYQVSSQSVPIDIYNVKAPP 135
K+ +N + N + + K + + + + VP+ IY PP
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPP 132
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/43 (23%), Positives = 20/43 (46%)
Frame = -3
Query: 263 KWCRESNTHINISLSIKYMYFLHGYQVSSQSVPIDIYNVKAPP 135
K+ +N + N + + K + + + + VP+ IY PP
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPP 132
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/43 (23%), Positives = 20/43 (46%)
Frame = -3
Query: 263 KWCRESNTHINISLSIKYMYFLHGYQVSSQSVPIDIYNVKAPP 135
K+ +N + N + + K + + + + VP+ IY PP
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPP 132
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = -3
Query: 308 IISHPHKDSHH*RPRKWCRESNTHINISLSIKYMYFLHGYQVSSQSVPIDIYNVKAPP 135
IIS ++ H K+ +N + N + + K Y + + VP+ +Y PP
Sbjct: 80 IISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNIINIEQIPVPVPVPVYCGNFPP 137
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = -3
Query: 308 IISHPHKDSHH*RPRKWCRESNTHINISLSIKYMYFLHGYQVSSQSVPIDIYNVKAPP 135
IIS ++ H K+ +N + N + + K Y + + VP+ +Y PP
Sbjct: 80 IISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNIINIEQIPVPVPVPVYCGNFPP 137
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 7.8
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -3
Query: 257 CRESNTHINISLSIKYMYFLHGYQVSSQSVPIDIYNVKAPP 135
C SN + N + K Y ++ + VP+ IY PP
Sbjct: 311 CNYSNNYYNNNNYKKLYYNINYIEQIPIPVPVPIYCGNFPP 351
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,727
Number of Sequences: 438
Number of extensions: 4475
Number of successful extensions: 40
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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