Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31401
         (534 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   3.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.7  
AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative odorant-b...    24   3.7  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   8.5  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 500 IFPWRDSNPRPPY 462
           + PW+D N  PPY
Sbjct: 932 LLPWQDRNNLPPY 944


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = -1

Query: 264  GTAL*ATSEEVGENKMP-CYYLTKSLTRT*QCLYRLRPPNTRWGSANI 124
            G  + A   E  +N +P CYY+ K L +T   L   + P   W  A++
Sbjct: 1736 GDCMIAAKFEPHDNWLPPCYYVPKELEQT---LIDAKIPACHWNLADL 1780


>AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative
           odorant-binding protein OBPjj2 protein.
          Length = 228

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 54  VAARNPCIRHVPLPSNRTRIMVA*Y*RNPISY 149
           V A NPC++  P+P N     V  +   P ++
Sbjct: 54  VFAGNPCLKGPPVPKNAAECCVTPFLVEPSAF 85


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 348 AESTAGSKSRPTEKIRRETQWQ 413
           AE+ AGS +R  E++    +WQ
Sbjct: 834 AENIAGSVARNMERVTTMERWQ 855


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,490
Number of Sequences: 2352
Number of extensions: 11312
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)